2026-05-29T04:21:19.270207Z 00O Running with gitlab-runner 19.0.0~pre.1138.ga0a1e0e8 (a0a1e0e8) 2026-05-29T04:21:19.270216Z 00O  on blue-2.saas-linux-medium-amd64.runners-manager.gitlab.com/default ZQ74L_riD, system ID: s_805fb2e5035f 2026-05-29T04:21:19.270221Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true 2026-05-29T04:21:19.270240Z 00O Resolving secrets 2026-05-29T04:21:19.270358Z 00O section_start:1780028479:prepare_executor 2026-05-29T04:21:19.270359Z 00O+Preparing the "docker+machine" executor 2026-05-29T04:21:19.403379Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-05-29T04:21:23.287273Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-05-29T04:21:23.287862Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-05-29T04:21:23.287870Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-05-29T04:21:49.929137Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-05-29T04:21:49.929208Z 00O section_end:1780028509:prepare_executor 2026-05-29T04:21:49.929210Z 00O+section_start:1780028509:prepare_script 2026-05-29T04:21:49.929290Z 00O+Preparing environment 2026-05-29T04:21:49.930125Z 00O Using effective pull policy of [always] for container sha256:59ac1509c1e68f411d861bc24b327cde559692563d1dbd3b14873c8bc9645bbf 2026-05-29T04:21:59.951954Z 01O Running on runner-zq74lrid-project-3622566-concurrent-0 via runner-zq74lrid-s-l-m-amd64-1780028409-b6b1c1e1... 2026-05-29T04:22:00.112034Z 00O section_end:1780028520:prepare_script 2026-05-29T04:22:00.112037Z 00O+section_start:1780028520:get_sources 2026-05-29T04:22:00.112533Z 00O+Getting source from Git repository 2026-05-29T04:22:00.491417Z 01O Gitaly correlation ID: 51db3b23889e49d1a99b41a32735c8bf 2026-05-29T04:22:00.497455Z 01O Fetching changes... 2026-05-29T04:22:00.500928Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-05-29T04:22:00.503152Z 01O Created fresh repository. 2026-05-29T04:22:06.131225Z 01O Checking out 1b998b10 as detached HEAD (ref is master)... 2026-05-29T04:22:06.323252Z 01O 2026-05-29T04:22:06.323256Z 01O Skipping Git submodules setup 2026-05-29T04:22:06.323263Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-05-29T04:22:06.533462Z 00O section_end:1780028526:get_sources 2026-05-29T04:22:06.533465Z 00O+section_start:1780028526:download_artifacts 2026-05-29T04:22:06.534177Z 00O+Downloading artifacts 2026-05-29T04:22:06.921447Z 01O Downloading artifacts for mirror-packages (14595616712)... 2026-05-29T04:22:07.112074Z 01E Direct download from storage.googleapis.com  correlation_id=f1983eb9f8ce4af3bc5030013d1b3667 id=14595616712 status=302 token=6f_cSX4Gy 2026-05-29T04:22:07.714506Z 01E Downloading artifacts from coordinator... ok  correlation_id=f1983eb9f8ce4af3bc5030013d1b3667 id=14595616712 status=302 token=6f_cSX4Gy 2026-05-29T04:22:08.370337Z 01O Downloading artifacts for build (14595616713)... 2026-05-29T04:22:08.578271Z 01E Direct download from storage.googleapis.com  correlation_id=1a5a8a3af4784172bca86922cb74a008 id=14595616713 status=302 token=6f_cSX4Gy 2026-05-29T04:22:08.756692Z 01E Downloading artifacts from coordinator... ok  correlation_id=1a5a8a3af4784172bca86922cb74a008 id=14595616713 status=302 token=6f_cSX4Gy 2026-05-29T04:22:09.386205Z 00O section_end:1780028529:download_artifacts 2026-05-29T04:22:09.386210Z 00O+section_start:1780028529:step_script 2026-05-29T04:22:09.386601Z 00O+Executing "step_script" stage of the job script 2026-05-29T04:22:09.386620Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-05-29T04:22:09.387459Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-05-29T04:22:09.729801Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-05-29T04:22:09.740309Z 01O $ mkdir -p ~/.R 2026-05-29T04:22:09.741949Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-05-29T04:22:09.921574Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘commonmark’ 2026-05-29T04:22:09.921576Z 01E 2026-05-29T04:22:47.497190Z 01E Updating HTML index of packages in '.Library' 2026-05-29T04:22:47.497850Z 01E Making 'packages.html' ... done 2026-05-29T04:22:47.512916Z 01E Warning message: 2026-05-29T04:22:47.512917Z 01E packages ‘xts’, ‘knitr’ are not available (for R version 3.5.0) 2026-05-29T04:22:47.522736Z 01O $ R CMD check --no-manual --no-build-vignettes --ignore-vignettes $(ls -1t data.table_*.tar.gz | head -n 1) 2026-05-29T04:22:47.685095Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-05-29T04:22:47.685231Z 01O * using R version 3.5.0 (2018-04-23) 2026-05-29T04:22:47.685584Z 01O * using platform: x86_64-pc-linux-gnu (64-bit) 2026-05-29T04:22:47.685875Z 01O * using session charset: UTF-8 2026-05-29T04:22:48.261980Z 01O * using options ‘--no-manual --ignore-vignettes’ 2026-05-29T04:22:48.262285Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-05-29T04:22:48.264816Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-05-29T04:22:48.265055Z 01O * package encoding: UTF-8 2026-05-29T04:22:48.265293Z 01O * checking package namespace information ... OK 2026-05-29T04:22:48.270782Z 01O * checking package dependencies ... NOTE 2026-05-29T04:22:53.831541Z 01O Package suggested but not available for checking: ‘xts’ 2026-05-29T04:22:53.831544Z 01O 2026-05-29T04:22:53.831544Z 01O Package which this enhances but not available for checking: ‘knitr’ 2026-05-29T04:22:53.831551Z 01O * checking if this is a source package ... OK 2026-05-29T04:22:53.835081Z 01O * checking if there is a namespace ... OK 2026-05-29T04:22:53.845752Z 01O * checking for executable files ... OK 2026-05-29T04:22:54.833336Z 01O * checking for hidden files and directories ... OK 2026-05-29T04:22:54.836992Z 01O * checking for portable file names ... OK 2026-05-29T04:22:54.844322Z 01O * checking for sufficient/correct file permissions ... OK 2026-05-29T04:22:54.846529Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-05-29T04:23:13.139989Z 01O * checking installed package size ... NOTE 2026-05-29T04:23:13.149674Z 01O installed size is 8.5Mb 2026-05-29T04:23:13.150584Z 01O sub-directories of 1Mb or more: 2026-05-29T04:23:13.151140Z 01O doc 1.1Mb 2026-05-29T04:23:13.151140Z 01O libs 2.2Mb 2026-05-29T04:23:13.151141Z 01O po 1.7Mb 2026-05-29T04:23:13.151141Z 01O tests 2.2Mb 2026-05-29T04:23:13.151453Z 01O * checking package directory ... OK 2026-05-29T04:23:13.151934Z 01O * checking DESCRIPTION meta-information ... OK 2026-05-29T04:23:13.354524Z 01O * checking top-level files ... OK 2026-05-29T04:23:13.355039Z 01O * checking for left-over files ... OK 2026-05-29T04:23:13.357903Z 01O * checking index information ... OK 2026-05-29T04:23:13.518313Z 01O * checking package subdirectories ... OK 2026-05-29T04:23:13.721142Z 01O * checking R files for non-ASCII characters ... OK 2026-05-29T04:23:13.771650Z 01O * checking R files for syntax errors ... OK 2026-05-29T04:23:13.872370Z 01O * checking whether the package can be loaded ... OK 2026-05-29T04:23:14.043010Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-05-29T04:23:14.182472Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-05-29T04:23:14.321962Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-05-29T04:23:14.465159Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-05-29T04:23:14.640704Z 01O * checking loading without being on the library search path ... OK 2026-05-29T04:23:14.821589Z 01O * checking dependencies in R code ... OK 2026-05-29T04:23:15.489572Z 01O * checking S3 generic/method consistency ... OK 2026-05-29T04:23:16.103819Z 01O * checking replacement functions ... OK 2026-05-29T04:23:16.275051Z 01O * checking foreign function calls ... OK 2026-05-29T04:23:16.923819Z 01O * checking R code for possible problems ... OK 2026-05-29T04:23:25.848055Z 01O * checking Rd files ... OK 2026-05-29T04:23:26.204438Z 01O * checking Rd metadata ... OK 2026-05-29T04:23:26.251562Z 01O * checking Rd cross-references ... OK 2026-05-29T04:23:26.493717Z 01O * checking for missing documentation entries ... OK 2026-05-29T04:23:26.698411Z 01O * checking for code/documentation mismatches ... OK 2026-05-29T04:23:27.624087Z 01O * checking Rd \usage sections ... OK 2026-05-29T04:23:28.670499Z 01O * checking Rd contents ... OK 2026-05-29T04:23:28.995292Z 01O * checking for unstated dependencies in examples ... OK 2026-05-29T04:23:29.448837Z 01O * checking line endings in shell scripts ... OK 2026-05-29T04:23:29.449816Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-05-29T04:23:29.459079Z 01O * checking line endings in Makefiles ... OK 2026-05-29T04:23:29.459606Z 01O * checking compilation flags in Makevars ... OK 2026-05-29T04:23:29.520844Z 01O * checking for GNU extensions in Makefiles ... OK 2026-05-29T04:23:29.521942Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-05-29T04:23:29.524979Z 01O * checking compiled code ... NOTE 2026-05-29T04:23:29.586877Z 01O File ‘data.table/libs/data_table.so’: 2026-05-29T04:23:29.586878Z 01O Found non-API calls to R: ‘R_GetConnection’, ‘R_ReadConnection’ 2026-05-29T04:23:29.587589Z 01O 2026-05-29T04:23:29.587590Z 01O Compiled code should not call non-API entry points in R. 2026-05-29T04:23:29.587591Z 01O 2026-05-29T04:23:29.587592Z 01O See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. 2026-05-29T04:23:29.588186Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-05-29T04:23:29.668146Z 01O * checking files in ‘vignettes’ ... SKIPPED 2026-05-29T04:23:29.668474Z 01O * checking examples ... OK 2026-05-29T04:23:33.083813Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-05-29T04:23:33.146204Z 01O * checking tests ... 2026-05-29T04:23:33.276345Z 01E Running ‘autoprint.R’ 2026-05-29T04:23:33.511187Z 01O 18,21d17 2026-05-29T04:23:33.511188Z 01O < a 2026-05-29T04:23:33.511188Z 01O < 2026-05-29T04:23:33.511189Z 01O < 1: 1 2026-05-29T04:23:33.511189Z 01O < 2: 3 2026-05-29T04:23:33.511190Z 01O 28,31d23 2026-05-29T04:23:33.511190Z 01O < a 2026-05-29T04:23:33.511190Z 01O < 2026-05-29T04:23:33.511191Z 01O < 1: 1 2026-05-29T04:23:33.511191Z 01O < 2: 3 2026-05-29T04:23:33.511192Z 01O 33,37d24 2026-05-29T04:23:33.511192Z 01O < Index: 2026-05-29T04:23:33.511192Z 01O < a 2026-05-29T04:23:33.511193Z 01O < 2026-05-29T04:23:33.511193Z 01O < 1: 1 2026-05-29T04:23:33.511194Z 01O < 2: 3 2026-05-29T04:23:33.511194Z 01O 39,43d25 2026-05-29T04:23:33.511194Z 01O < Index: 2026-05-29T04:23:33.511195Z 01O < a 2026-05-29T04:23:33.511195Z 01O < 2026-05-29T04:23:33.511195Z 01O < 1: 1 2026-05-29T04:23:33.511196Z 01O < 2: 3 2026-05-29T04:23:33.511196Z 01O 61,64d42 2026-05-29T04:23:33.511196Z 01O < a 2026-05-29T04:23:33.511197Z 01O < 2026-05-29T04:23:33.511197Z 01O < 1: 1 2026-05-29T04:23:33.511197Z 01O < 2: 5 2026-05-29T04:23:33.511198Z 01O 66,69d43 2026-05-29T04:23:33.511198Z 01O < a 2026-05-29T04:23:33.511198Z 01O < 2026-05-29T04:23:33.511199Z 01O < 1: 1 2026-05-29T04:23:33.511199Z 01O < 2: 6 2026-05-29T04:23:33.511200Z 01O 73,76d46 2026-05-29T04:23:33.511200Z 01O < a 2026-05-29T04:23:33.511200Z 01O < 2026-05-29T04:23:33.511201Z 01O < 1: 1 2026-05-29T04:23:33.511201Z 01O < 2: 5 2026-05-29T04:23:33.511201Z 01O 143,145d112 2026-05-29T04:23:33.511202Z 01O < a 2026-05-29T04:23:33.511202Z 01O < 2026-05-29T04:23:33.511202Z 01O < 1: 9 2026-05-29T04:23:33.511203Z 01O 151,154d117 2026-05-29T04:23:33.511203Z 01O < a 2026-05-29T04:23:33.511203Z 01O < 2026-05-29T04:23:33.511204Z 01O < 1: 10 2026-05-29T04:23:33.511204Z 01O < 2: 10 2026-05-29T04:23:33.511204Z 01O 156,159d118 2026-05-29T04:23:33.511230Z 01O < a 2026-05-29T04:23:33.511231Z 01O < 2026-05-29T04:23:33.511231Z 01O < 1: 10 2026-05-29T04:23:33.511231Z 01O < 2: 10 2026-05-29T04:23:33.511232Z 01O 161,164d119 2026-05-29T04:23:33.511232Z 01O < a 2026-05-29T04:23:33.511232Z 01O < 2026-05-29T04:23:33.511233Z 01O < 1: 10 2026-05-29T04:23:33.511233Z 01O < 2: 10 2026-05-29T04:23:33.511233Z 01O 210,212d164 2026-05-29T04:23:33.511234Z 01O < x y 2026-05-29T04:23:33.511234Z 01O < 2026-05-29T04:23:33.511234Z 01O < 1: 1 1 2026-05-29T04:23:33.503828Z 01E Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... Running ‘froll.R’ 2026-05-29T04:32:56.439851Z 01E Running ‘litedown.R’ 2026-05-29T04:32:56.739419Z 01E Running ‘main.R’ 2026-05-29T04:33:37.204720Z 01E Running ‘mergelist.R’ 2026-05-29T04:33:38.508849Z 01E Running ‘nafill.R’ 2026-05-29T04:33:38.940555Z 01E Running ‘optimize.R’ 2026-05-29T04:33:40.122482Z 01E Running ‘other.R’ 2026-05-29T04:33:40.324908Z 01E Running ‘programming.R’ 2026-05-29T04:33:40.911723Z 01E Running ‘S4.R’ 2026-05-29T04:33:41.208943Z 01E Running ‘types.R’ 2026-05-29T04:33:41.450289Z 01O OK 2026-05-29T04:33:41.451808Z 01O * DONE 2026-05-29T04:33:41.452824Z 01E 2026-05-29T04:33:41.452888Z 01O Status: 3 NOTEs 2026-05-29T04:33:41.453215Z 01E See 2026-05-29T04:33:41.453216Z 01E ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’ 2026-05-29T04:33:41.453217Z 01E for details. 2026-05-29T04:33:41.453217Z 01E 2026-05-29T04:33:41.453482Z 01E 2026-05-29T04:33:41.644924Z 00O section_end:1780029221:step_script 2026-05-29T04:33:41.644928Z 00O+section_start:1780029221:after_script 2026-05-29T04:33:41.645346Z 00O+Running after_script 2026-05-29T04:33:42.016175Z 01O Running after script... 2026-05-29T04:33:42.016196Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-05-29T04:33:42.017625Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-05-29T04:33:42.017659Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-05-29T04:33:42.017739Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-05-29T04:33:42.017952Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-05-29T04:33:42.192084Z 00O section_end:1780029222:after_script 2026-05-29T04:33:42.192087Z 00O+section_start:1780029222:upload_artifacts_on_success 2026-05-29T04:33:42.192724Z 00O+Uploading artifacts for successful job 2026-05-29T04:33:42.600846Z 01O Uploading artifacts... 2026-05-29T04:33:42.664301Z 01E bus/test-lin-ancient-cran: found 694 matching artifact files and directories 2026-05-29T04:33:45.056982Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=6ac03aec13ac4bb9b6224fc73aecec9e id=14595616719 status=201 token=6f_cSX4Gy 2026-05-29T04:33:45.227887Z 00O section_end:1780029225:upload_artifacts_on_success 2026-05-29T04:33:45.227892Z 00O+section_start:1780029225:cleanup_file_variables 2026-05-29T04:33:45.227985Z 00O+Cleaning up project directory and file based variables 2026-05-29T04:33:45.725451Z 00O section_end:1780029225:cleanup_file_variables 2026-05-29T04:33:45.725455Z 00O+ 2026-05-29T04:33:45.750254Z 00O Job succeeded