2026-04-13T04:22:06.172313Z 00O Running with gitlab-runner 18.10.0~pre.705.ge11dde90 (e11dde90) 2026-04-13T04:22:06.172327Z 00O  on blue-3.saas-linux-medium-amd64.runners-manager.gitlab.com/default U4xQPDyhm, system ID: s_b59597d5b921 2026-04-13T04:22:06.172333Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true 2026-04-13T04:22:06.172352Z 00O Resolving secrets 2026-04-13T04:22:06.172465Z 00O section_start:1776054126:prepare_executor 2026-04-13T04:22:06.172466Z 00O+Preparing the "docker+machine" executor 2026-04-13T04:22:06.302838Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-04-13T04:22:10.363319Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-04-13T04:22:10.363832Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-04-13T04:22:10.363842Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-04-13T04:22:38.324902Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-04-13T04:22:38.324982Z 00O section_end:1776054158:prepare_executor 2026-04-13T04:22:38.324983Z 00O+section_start:1776054158:prepare_script 2026-04-13T04:22:38.325067Z 00O+Preparing environment 2026-04-13T04:22:38.325735Z 00O Using effective pull policy of [always] for container sha256:3783595b7670134933f7b011812782294604c491b2cc99d318ff44c688149da0 2026-04-13T04:22:48.061995Z 01O Running on runner-u4xqpdyhm-project-3622566-concurrent-0 via runner-u4xqpdyhm-s-l-m-amd64-1776053849-e9b1f2c0... 2026-04-13T04:22:48.242115Z 00O section_end:1776054168:prepare_script 2026-04-13T04:22:48.242121Z 00O+section_start:1776054168:get_sources 2026-04-13T04:22:48.242634Z 00O+Getting source from Git repository 2026-04-13T04:22:48.618936Z 01O Gitaly correlation ID: 005c2086ed524a4baee2b4faa4beff67 2026-04-13T04:22:48.625476Z 01O Fetching changes... 2026-04-13T04:22:48.628793Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-04-13T04:22:48.631175Z 01O Created fresh repository. 2026-04-13T04:22:54.307965Z 01O Checking out 8364344c as detached HEAD (ref is master)... 2026-04-13T04:22:54.504672Z 01O 2026-04-13T04:22:54.504675Z 01O Skipping Git submodules setup 2026-04-13T04:22:54.504675Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-04-13T04:22:54.744088Z 00O section_end:1776054174:get_sources 2026-04-13T04:22:54.744093Z 00O+section_start:1776054174:download_artifacts 2026-04-13T04:22:54.744831Z 00O+Downloading artifacts 2026-04-13T04:22:55.170161Z 01O Downloading artifacts for build (13888029259)... 2026-04-13T04:22:55.458397Z 01E Downloading artifacts from coordinator... ok  correlation_id=561dcb77c55d4d9faaf03ce19c994f9d host=storage.googleapis.com id=13888029259 responseStatus=200 OK token=6e_BMwYHx 2026-04-13T04:22:55.476072Z 01O Downloading artifacts for mirror-packages (13888029255)... 2026-04-13T04:22:56.485632Z 01E Downloading artifacts from coordinator... ok  correlation_id=f5113b44aa134a2aaf24310c83ffb2c5 host=storage.googleapis.com id=13888029255 responseStatus=200 OK token=6e_BMwYHx 2026-04-13T04:22:57.521159Z 00O section_end:1776054177:download_artifacts 2026-04-13T04:22:57.521164Z 00O+section_start:1776054177:step_script 2026-04-13T04:22:57.521569Z 00O+Executing "step_script" stage of the job script 2026-04-13T04:22:57.521588Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-04-13T04:22:57.522633Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-04-13T04:22:57.900652Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-04-13T04:22:57.910362Z 01O $ mkdir -p ~/.R 2026-04-13T04:22:57.911774Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-04-13T04:22:58.094899Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘commonmark’ 2026-04-13T04:22:58.094906Z 01E 2026-04-13T04:23:35.242291Z 01E Updating HTML index of packages in '.Library' 2026-04-13T04:23:35.242757Z 01E Making 'packages.html' ... done 2026-04-13T04:23:35.257105Z 01E Warning message: 2026-04-13T04:23:35.257105Z 01E packages ‘xts’, ‘knitr’ are not available (for R version 3.5.0) 2026-04-13T04:23:35.265992Z 01O $ R CMD check --no-manual --no-build-vignettes --ignore-vignettes $(ls -1t data.table_*.tar.gz | head -n 1) 2026-04-13T04:23:35.415782Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-04-13T04:23:35.416019Z 01O * using R version 3.5.0 (2018-04-23) 2026-04-13T04:23:35.416418Z 01O * using platform: x86_64-pc-linux-gnu (64-bit) 2026-04-13T04:23:35.416671Z 01O * using session charset: UTF-8 2026-04-13T04:23:35.987743Z 01O * using options ‘--no-manual --ignore-vignettes’ 2026-04-13T04:23:35.987929Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-04-13T04:23:35.990413Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-04-13T04:23:35.990613Z 01O * package encoding: UTF-8 2026-04-13T04:23:35.990833Z 01O * checking package namespace information ... OK 2026-04-13T04:23:35.996388Z 01O * checking package dependencies ... NOTE 2026-04-13T04:23:41.516162Z 01O Package suggested but not available for checking: ‘xts’ 2026-04-13T04:23:41.516164Z 01O 2026-04-13T04:23:41.516164Z 01O Package which this enhances but not available for checking: ‘knitr’ 2026-04-13T04:23:41.516170Z 01O * checking if this is a source package ... OK 2026-04-13T04:23:41.519836Z 01O * checking if there is a namespace ... OK 2026-04-13T04:23:41.528828Z 01O * checking for executable files ... OK 2026-04-13T04:23:42.524969Z 01O * checking for hidden files and directories ... OK 2026-04-13T04:23:42.528720Z 01O * checking for portable file names ... OK 2026-04-13T04:23:42.536342Z 01O * checking for sufficient/correct file permissions ... OK 2026-04-13T04:23:42.538587Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-04-13T04:24:00.970689Z 01O * checking installed package size ... NOTE 2026-04-13T04:24:00.979146Z 01O installed size is 8.5Mb 2026-04-13T04:24:00.980007Z 01O sub-directories of 1Mb or more: 2026-04-13T04:24:00.980574Z 01O doc 1.1Mb 2026-04-13T04:24:00.980575Z 01O libs 2.1Mb 2026-04-13T04:24:00.980575Z 01O po 1.7Mb 2026-04-13T04:24:00.980576Z 01O tests 2.2Mb 2026-04-13T04:24:00.980941Z 01O * checking package directory ... OK 2026-04-13T04:24:00.981420Z 01O * checking DESCRIPTION meta-information ... OK 2026-04-13T04:24:01.179199Z 01O * checking top-level files ... OK 2026-04-13T04:24:01.179566Z 01O * checking for left-over files ... OK 2026-04-13T04:24:01.182516Z 01O * checking index information ... OK 2026-04-13T04:24:01.343596Z 01O * checking package subdirectories ... OK 2026-04-13T04:24:01.548542Z 01O * checking R files for non-ASCII characters ... OK 2026-04-13T04:24:01.600750Z 01O * checking R files for syntax errors ... OK 2026-04-13T04:24:01.701586Z 01O * checking whether the package can be loaded ... OK 2026-04-13T04:24:01.874328Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-04-13T04:24:02.019994Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-04-13T04:24:02.163696Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-04-13T04:24:02.303117Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-04-13T04:24:02.482653Z 01O * checking loading without being on the library search path ... OK 2026-04-13T04:24:02.661016Z 01O * checking dependencies in R code ... OK 2026-04-13T04:24:03.277395Z 01O * checking S3 generic/method consistency ... OK 2026-04-13T04:24:03.876075Z 01O * checking replacement functions ... OK 2026-04-13T04:24:04.045783Z 01O * checking foreign function calls ... OK 2026-04-13T04:24:04.698545Z 01O * checking R code for possible problems ... OK 2026-04-13T04:24:13.368265Z 01O * checking Rd files ... OK 2026-04-13T04:24:13.719235Z 01O * checking Rd metadata ... OK 2026-04-13T04:24:13.764568Z 01O * checking Rd cross-references ... OK 2026-04-13T04:24:13.972766Z 01O * checking for missing documentation entries ... OK 2026-04-13T04:24:14.193442Z 01O * checking for code/documentation mismatches ... OK 2026-04-13T04:24:15.142978Z 01O * checking Rd \usage sections ... OK 2026-04-13T04:24:16.173175Z 01O * checking Rd contents ... OK 2026-04-13T04:24:16.474408Z 01O * checking for unstated dependencies in examples ... OK 2026-04-13T04:24:16.953734Z 01O * checking line endings in shell scripts ... OK 2026-04-13T04:24:16.954486Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-04-13T04:24:16.963068Z 01O * checking line endings in Makefiles ... OK 2026-04-13T04:24:16.963619Z 01O * checking compilation flags in Makevars ... OK 2026-04-13T04:24:17.020453Z 01O * checking for GNU extensions in Makefiles ... OK 2026-04-13T04:24:17.021575Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-04-13T04:24:17.024626Z 01O * checking compiled code ... NOTE 2026-04-13T04:24:17.084628Z 01O File ‘data.table/libs/data_table.so’: 2026-04-13T04:24:17.084630Z 01O Found non-API calls to R: ‘R_GetConnection’, ‘R_ReadConnection’ 2026-04-13T04:24:17.085290Z 01O 2026-04-13T04:24:17.085291Z 01O Compiled code should not call non-API entry points in R. 2026-04-13T04:24:17.085291Z 01O 2026-04-13T04:24:17.085292Z 01O See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. 2026-04-13T04:24:17.085818Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-04-13T04:24:17.153249Z 01O * checking files in ‘vignettes’ ... SKIPPED 2026-04-13T04:24:17.153662Z 01O * checking examples ... OK 2026-04-13T04:24:20.425030Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-04-13T04:24:20.496837Z 01O * checking tests ... 2026-04-13T04:24:20.628839Z 01E Running ‘autoprint.R’ 2026-04-13T04:24:20.855643Z 01O 18,21d17 2026-04-13T04:24:20.855646Z 01O < a 2026-04-13T04:24:20.855647Z 01O < 2026-04-13T04:24:20.855647Z 01O < 1: 1 2026-04-13T04:24:20.855648Z 01O < 2: 3 2026-04-13T04:24:20.855649Z 01O 28,31d23 2026-04-13T04:24:20.855649Z 01O < a 2026-04-13T04:24:20.855650Z 01O < 2026-04-13T04:24:20.855650Z 01O < 1: 1 2026-04-13T04:24:20.855651Z 01O < 2: 3 2026-04-13T04:24:20.855651Z 01O 33,37d24 2026-04-13T04:24:20.855651Z 01O < Index: 2026-04-13T04:24:20.855652Z 01O < a 2026-04-13T04:24:20.855652Z 01O < 2026-04-13T04:24:20.855653Z 01O < 1: 1 2026-04-13T04:24:20.855653Z 01O < 2: 3 2026-04-13T04:24:20.855654Z 01O 39,43d25 2026-04-13T04:24:20.855654Z 01O < Index: 2026-04-13T04:24:20.855654Z 01O < a 2026-04-13T04:24:20.855655Z 01O < 2026-04-13T04:24:20.855655Z 01O < 1: 1 2026-04-13T04:24:20.855656Z 01O < 2: 3 2026-04-13T04:24:20.855656Z 01O 61,64d42 2026-04-13T04:24:20.855656Z 01O < a 2026-04-13T04:24:20.855657Z 01O < 2026-04-13T04:24:20.855657Z 01O < 1: 1 2026-04-13T04:24:20.855658Z 01O < 2: 5 2026-04-13T04:24:20.855658Z 01O 66,69d43 2026-04-13T04:24:20.855658Z 01O < a 2026-04-13T04:24:20.855659Z 01O < 2026-04-13T04:24:20.855659Z 01O < 1: 1 2026-04-13T04:24:20.855660Z 01O < 2: 6 2026-04-13T04:24:20.855660Z 01O 73,76d46 2026-04-13T04:24:20.855660Z 01O < a 2026-04-13T04:24:20.855661Z 01O < 2026-04-13T04:24:20.855661Z 01O < 1: 1 2026-04-13T04:24:20.855662Z 01O < 2: 5 2026-04-13T04:24:20.855662Z 01O 143,145d112 2026-04-13T04:24:20.855662Z 01O < a 2026-04-13T04:24:20.855663Z 01O < 2026-04-13T04:24:20.855663Z 01O < 1: 9 2026-04-13T04:24:20.855664Z 01O 151,154d117 2026-04-13T04:24:20.855664Z 01O < a 2026-04-13T04:24:20.855664Z 01O < 2026-04-13T04:24:20.855665Z 01O < 1: 10 2026-04-13T04:24:20.855665Z 01O < 2: 10 2026-04-13T04:24:20.855666Z 01O 156,159d118 2026-04-13T04:24:20.855694Z 01O < a 2026-04-13T04:24:20.855694Z 01O < 2026-04-13T04:24:20.855695Z 01O < 1: 10 2026-04-13T04:24:20.855695Z 01O < 2: 10 2026-04-13T04:24:20.855696Z 01O 161,164d119 2026-04-13T04:24:20.855696Z 01O < a 2026-04-13T04:24:20.855697Z 01O < 2026-04-13T04:24:20.855697Z 01O < 1: 10 2026-04-13T04:24:20.855697Z 01O < 2: 10 2026-04-13T04:24:20.855698Z 01O 210,212d164 2026-04-13T04:24:20.855698Z 01O < x y 2026-04-13T04:24:20.855699Z 01O < 2026-04-13T04:24:20.855699Z 01O < 1: 1 1 2026-04-13T04:24:20.848256Z 01E Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... Running ‘froll.R’ 2026-04-13T04:33:30.388971Z 01E Running ‘litedown.R’ 2026-04-13T04:33:30.672952Z 01E Running ‘main.R’ 2026-04-13T04:34:10.132451Z 01E Running ‘mergelist.R’ 2026-04-13T04:34:11.472006Z 01E Running ‘nafill.R’ 2026-04-13T04:34:11.888840Z 01E Running ‘optimize.R’ 2026-04-13T04:34:13.033908Z 01E Running ‘other.R’ 2026-04-13T04:34:13.228217Z 01E Running ‘programming.R’ 2026-04-13T04:34:13.740753Z 01E Running ‘S4.R’ 2026-04-13T04:34:14.017265Z 01E Running ‘types.R’ 2026-04-13T04:34:14.232293Z 01O OK 2026-04-13T04:34:14.233427Z 01O * DONE 2026-04-13T04:34:14.234273Z 01E 2026-04-13T04:34:14.234386Z 01O Status: 3 NOTEs 2026-04-13T04:34:14.234617Z 01E See 2026-04-13T04:34:14.234618Z 01E ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’ 2026-04-13T04:34:14.234619Z 01E for details. 2026-04-13T04:34:14.234619Z 01E 2026-04-13T04:34:14.234885Z 01E 2026-04-13T04:34:14.419563Z 00O section_end:1776054854:step_script 2026-04-13T04:34:14.419568Z 00O+section_start:1776054854:after_script 2026-04-13T04:34:14.419944Z 00O+Running after_script 2026-04-13T04:34:14.772132Z 01O Running after script... 2026-04-13T04:34:14.772153Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-04-13T04:34:14.773374Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-04-13T04:34:14.773450Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-04-13T04:34:14.773591Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-04-13T04:34:14.773717Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-04-13T04:34:14.952204Z 00O section_end:1776054854:after_script 2026-04-13T04:34:14.952208Z 00O+section_start:1776054854:upload_artifacts_on_success 2026-04-13T04:34:14.952899Z 00O+Uploading artifacts for successful job 2026-04-13T04:34:15.370571Z 01O Uploading artifacts... 2026-04-13T04:34:15.454533Z 01E bus/test-lin-ancient-cran: found 694 matching artifact files and directories 2026-04-13T04:34:17.658453Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=762586b0dcd243b185371a172a4737be id=13888029311 responseStatus=201 Created token=6e_BMwYHx 2026-04-13T04:34:17.844135Z 00O section_end:1776054857:upload_artifacts_on_success 2026-04-13T04:34:17.844139Z 00O+section_start:1776054857:cleanup_file_variables 2026-04-13T04:34:17.844249Z 00O+Cleaning up project directory and file based variables 2026-04-13T04:34:18.373361Z 00O section_end:1776054858:cleanup_file_variables 2026-04-13T04:34:18.373364Z 00O+ 2026-04-13T04:34:18.401575Z 00O Job succeeded