2026-05-29T04:21:19.554843Z 00O Running with gitlab-runner 19.0.0~pre.1138.ga0a1e0e8 (a0a1e0e8) 2026-05-29T04:21:19.554853Z 00O  on blue-5.saas-linux-medium-amd64.runners-manager.gitlab.com/default nEW2M-oDE, system ID: s_fe9b8d77dc4b 2026-05-29T04:21:19.554857Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true 2026-05-29T04:21:19.554874Z 00O Resolving secrets 2026-05-29T04:21:19.554999Z 00O section_start:1780028479:prepare_executor 2026-05-29T04:21:19.555000Z 00O+Preparing the "docker+machine" executor 2026-05-29T04:21:19.689800Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san ... 2026-05-29T04:21:23.521548Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san 2026-05-29T04:21:23.522038Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-05-29T04:21:23.522049Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san ... 2026-05-29T04:21:41.945611Z 00O Using docker image sha256:f3785b72ce1a0be7b869728ecada6063e5233859e6be0a856512df8fdf5a362c for registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san@sha256:3baf212e122da6f03049298779ced7ec97952b4b3f377711ce4c288837446c30 ... 2026-05-29T04:21:41.945680Z 00O section_end:1780028501:prepare_executor 2026-05-29T04:21:41.945681Z 00O+section_start:1780028501:prepare_script 2026-05-29T04:21:41.945751Z 00O+Preparing environment 2026-05-29T04:21:41.946425Z 00O Using effective pull policy of [always] for container sha256:19d64197fe792815e22d7373a91318e4b4f37d50a3fd5ae14baad3fd41e7aab2 2026-05-29T04:21:48.458986Z 01O Running on runner-new2m-ode-project-3622566-concurrent-0 via runner-new2m-ode-s-l-m-amd64-1780028387-f30a9392... 2026-05-29T04:21:48.598568Z 00O section_end:1780028508:prepare_script 2026-05-29T04:21:48.598571Z 00O+section_start:1780028508:get_sources 2026-05-29T04:21:48.599036Z 00O+Getting source from Git repository 2026-05-29T04:21:48.905066Z 01O Gitaly correlation ID: 35bbfe04bd194d54baf8f81dcae0e5d7 2026-05-29T04:21:48.910474Z 01O Fetching changes... 2026-05-29T04:21:48.913066Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-05-29T04:21:48.914827Z 01O Created fresh repository. 2026-05-29T04:21:54.270174Z 01O Checking out 1b998b10 as detached HEAD (ref is master)... 2026-05-29T04:21:54.445258Z 01O 2026-05-29T04:21:54.445263Z 01O Skipping Git submodules setup 2026-05-29T04:21:54.445264Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-05-29T04:21:54.627171Z 00O section_end:1780028514:get_sources 2026-05-29T04:21:54.627175Z 00O+section_start:1780028514:download_artifacts 2026-05-29T04:21:54.628026Z 00O+Downloading artifacts 2026-05-29T04:21:54.963493Z 01O Downloading artifacts for mirror-packages (14595616712)... 2026-05-29T04:21:55.144531Z 01E Direct download from storage.googleapis.com  correlation_id=bec803d207444d8c8569db15aee46eab id=14595616712 status=302 token=6f_2nWp16 2026-05-29T04:21:55.677127Z 01E Downloading artifacts from coordinator... ok  correlation_id=bec803d207444d8c8569db15aee46eab id=14595616712 status=302 token=6f_2nWp16 2026-05-29T04:21:56.293871Z 01O Downloading artifacts for build (14595616713)... 2026-05-29T04:21:56.446773Z 01E Direct download from storage.googleapis.com  correlation_id=576252f968794b5d9a19ebba3fa87334 id=14595616713 status=302 token=6f_2nWp16 2026-05-29T04:21:56.661332Z 01E Downloading artifacts from coordinator... ok  correlation_id=576252f968794b5d9a19ebba3fa87334 id=14595616713 status=302 token=6f_2nWp16 2026-05-29T04:21:57.311552Z 00O section_end:1780028517:download_artifacts 2026-05-29T04:21:57.311556Z 00O+section_start:1780028517:step_script 2026-05-29T04:21:57.312633Z 00O+Executing "step_script" stage of the job script 2026-05-29T04:21:57.312659Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san 2026-05-29T04:21:57.314132Z 00O Using docker image sha256:f3785b72ce1a0be7b869728ecada6063e5233859e6be0a856512df8fdf5a362c for registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san@sha256:3baf212e122da6f03049298779ced7ec97952b4b3f377711ce4c288837446c30 ... 2026-05-29T04:21:57.610241Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-05-29T04:21:57.617125Z 01O $ mkdir -p ~/.R 2026-05-29T04:21:57.618161Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-05-29T04:21:58.272561Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’ 2026-05-29T04:21:58.272566Z 01E 2026-05-29T04:25:32.829641Z 01E Updating HTML index of packages in '.Library' 2026-05-29T04:25:32.832145Z 01E Making 'packages.html' ... done 2026-05-29T04:25:32.863524Z 01O $ res1=0; ASAN_OPTIONS=detect_leaks=1 R CMD check --no-manual $(ls -1t data.table_*.tar.gz | head -n 1) || res1=$? # collapsed multi-line command 2026-05-29T04:25:34.424482Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-05-29T04:25:34.425086Z 01O * using R Under development (unstable) (2026-05-27 r90083) 2026-05-29T04:25:34.425698Z 01O * using platform: x86_64-pc-linux-gnu 2026-05-29T04:25:34.426287Z 01O * R was compiled by 2026-05-29T04:25:34.426769Z 01O Debian clang version 21.1.8 (7+b1) 2026-05-29T04:25:34.426769Z 01O GNU Fortran (Debian 15.2.0-17) 15.2.0 2026-05-29T04:25:34.427255Z 01O * running under: Debian GNU/Linux forky/sid 2026-05-29T04:25:34.427837Z 01O * using session charset: UTF-8 2026-05-29T04:25:34.429718Z 01O * current time: 2026-05-29 04:25:34 UTC 2026-05-29T04:25:36.777396Z 01O * using option ‘--no-manual’ 2026-05-29T04:25:36.778562Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-05-29T04:25:36.787493Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-05-29T04:25:36.788151Z 01O * package encoding: UTF-8 2026-05-29T04:25:36.788966Z 01O * checking package namespace information ... OK 2026-05-29T04:25:36.818557Z 01O * checking package dependencies ... OK 2026-05-29T04:25:39.286802Z 01O * checking if this is a source package ... OK 2026-05-29T04:25:39.291966Z 01O * checking if there is a namespace ... OK 2026-05-29T04:25:39.298019Z 01O * checking for .dll and .exe files ... OK 2026-05-29T04:25:39.299411Z 01O * checking for hidden files and directories ... OK 2026-05-29T04:25:39.303545Z 01O * checking for portable file names ... OK 2026-05-29T04:25:39.317445Z 01O * checking for sufficient/correct file permissions ... OK 2026-05-29T04:25:39.320542Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-05-29T04:26:34.468549Z 01O * used C compiler: ‘Debian clang version 21.1.8 (7+b1)’ 2026-05-29T04:26:34.469745Z 01O * checking installed package size ... INFO 2026-05-29T04:26:34.475668Z 01O installed size is 11.0Mb 2026-05-29T04:26:34.477706Z 01O sub-directories of 1Mb or more: 2026-05-29T04:26:34.479423Z 01O doc 1.1Mb 2026-05-29T04:26:34.479424Z 01O libs 4.6Mb 2026-05-29T04:26:34.479424Z 01O po 1.7Mb 2026-05-29T04:26:34.479425Z 01O tests 2.2Mb 2026-05-29T04:26:34.480015Z 01O * checking package directory ... OK 2026-05-29T04:26:34.481067Z 01O * checking ‘build’ directory ... OK 2026-05-29T04:26:34.483233Z 01O * checking DESCRIPTION meta-information ... OK 2026-05-29T04:26:36.878492Z 01O * checking top-level files ... OK 2026-05-29T04:26:36.880604Z 01O * checking for left-over files ... OK 2026-05-29T04:26:36.885080Z 01O * checking index information ... OK 2026-05-29T04:26:37.544510Z 01O * checking package subdirectories ... OK 2026-05-29T04:26:38.848608Z 01O * checking code files for non-ASCII characters ... OK 2026-05-29T04:26:39.006974Z 01O * checking R files for syntax errors ... OK 2026-05-29T04:26:39.269197Z 01O * checking whether the package can be loaded ... OK 2026-05-29T04:26:39.923577Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-05-29T04:26:40.454106Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-05-29T04:26:40.977080Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-05-29T04:26:41.516876Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-05-29T04:26:42.195807Z 01O * checking loading without being on the library search path ... OK 2026-05-29T04:26:43.536562Z 01O * checking whether startup messages can be suppressed ... OK 2026-05-29T04:26:44.187717Z 01O * checking dependencies in R code ... OK 2026-05-29T04:26:46.670198Z 01O * checking S3 generic/method consistency ... OK 2026-05-29T04:26:47.839293Z 01O * checking replacement functions ... OK 2026-05-29T04:26:48.443874Z 01O * checking foreign function calls ... OK 2026-05-29T04:26:50.899080Z 01O * checking R code for possible problems ... OK 2026-05-29T04:27:34.437470Z 01O * checking Rd files ... OK 2026-05-29T04:27:36.863718Z 01O * checking Rd metadata ... OK 2026-05-29T04:27:36.999382Z 01O * checking Rd cross-references ... OK 2026-05-29T04:27:38.082921Z 01O * checking for missing documentation entries ... OK 2026-05-29T04:27:38.862042Z 01O * checking for code/documentation mismatches ... OK 2026-05-29T04:27:42.157185Z 01O * checking Rd \usage sections ... OK 2026-05-29T04:27:45.233436Z 01O * checking Rd contents ... OK 2026-05-29T04:27:46.886085Z 01O * checking for unstated dependencies in examples ... OK 2026-05-29T04:27:48.377826Z 01O * checking line endings in shell scripts ... OK 2026-05-29T04:27:48.379411Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-05-29T04:27:48.438404Z 01O * checking line endings in Makefiles ... OK 2026-05-29T04:27:48.439809Z 01O * checking compilation flags in Makevars ... OK 2026-05-29T04:27:48.582985Z 01O * checking for GNU extensions in Makefiles ... OK 2026-05-29T04:27:48.585382Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-05-29T04:27:48.589315Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK 2026-05-29T04:27:48.600363Z 01O * checking compiled code ... OK 2026-05-29T04:27:48.824993Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-05-29T04:27:49.552940Z 01O * checking files in ‘vignettes’ ... OK 2026-05-29T04:27:50.287615Z 01O * checking examples ... OK 2026-05-29T04:27:58.346183Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-05-29T04:27:58.561476Z 01O * checking tests ... 2026-05-29T04:27:58.974863Z 01O Running ‘autoprint.R’ 2026-05-29T04:27:59.750760Z 01O Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK 2026-05-29T04:27:59.766965Z 01O Running ‘froll.R’ 2026-05-29T04:58:13.367263Z 01O Running ‘litedown.R’ 2026-05-29T04:58:14.333959Z 01O Running ‘main.R’ 2026-05-29T05:00:31.983917Z 01O Running ‘mergelist.R’ 2026-05-29T05:00:37.566882Z 01O Running ‘nafill.R’ 2026-05-29T05:00:39.255981Z 01O Running ‘optimize.R’ 2026-05-29T05:00:43.848293Z 01O Running ‘other.R’ 2026-05-29T05:00:44.504875Z 01O Running ‘programming.R’ 2026-05-29T05:00:46.326230Z 01O Running ‘S4.R’ 2026-05-29T05:00:47.334901Z 01O Running ‘types.R’ 2026-05-29T05:00:48.177178Z 01O OK 2026-05-29T05:00:48.529643Z 01O * checking for unstated dependencies in vignettes ... OK 2026-05-29T05:00:49.517025Z 01O * checking package vignettes ... OK 2026-05-29T05:00:50.626976Z 01O * checking re-building of vignette outputs ... OK 2026-05-29T05:01:57.311585Z 01O * DONE 2026-05-29T05:01:57.312852Z 01E 2026-05-29T05:01:57.313004Z 01O Status: OK 2026-05-29T05:01:57.313408Z 01E 2026-05-29T05:01:57.742251Z 00O section_end:1780030917:step_script 2026-05-29T05:01:57.742255Z 00O+section_start:1780030917:after_script 2026-05-29T05:01:57.742650Z 00O+Running after_script 2026-05-29T05:01:58.038366Z 01O Running after script... 2026-05-29T05:01:58.038386Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-05-29T05:01:58.039368Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-05-29T05:01:58.039369Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-05-29T05:01:58.039445Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-05-29T05:01:58.039445Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-05-29T05:01:58.190179Z 00O section_end:1780030918:after_script 2026-05-29T05:01:58.190182Z 00O+section_start:1780030918:upload_artifacts_on_success 2026-05-29T05:01:58.190863Z 00O+Uploading artifacts for successful job 2026-05-29T05:01:58.529800Z 01O Uploading artifacts... 2026-05-29T05:01:58.579900Z 01E bus/test-lin-dev-clang-san: found 707 matching artifact files and directories 2026-05-29T05:02:00.964445Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=d9d13d9a051f4fadad4737c9e9444ea2 id=14595616720 status=201 token=6f_2nWp16 2026-05-29T05:02:01.117360Z 00O section_end:1780030921:upload_artifacts_on_success 2026-05-29T05:02:01.117366Z 00O+section_start:1780030921:cleanup_file_variables 2026-05-29T05:02:01.117464Z 00O+Cleaning up project directory and file based variables 2026-05-29T05:02:01.565204Z 00O section_end:1780030921:cleanup_file_variables 2026-05-29T05:02:01.565208Z 00O+ 2026-05-29T05:02:01.592466Z 00O Job succeeded