2026-10-12T04:21:04.864240Z 00O Running with gitlab-runner 19.5.0~pre.2272.g28a18501 (28a18501)
2026-10-12T04:21:04.864256Z 00O   on k8s.saas-linux-medium-amd64.runners-manager.gitlab.com/default j8vTLRhES, system ID: r_T0s7awxoFjKg
2026-10-12T04:21:04.864258Z 00O   UUID: 01a01aa6-2f91-7d2c-b24d-7e2d2752ac58
2026-10-12T04:21:04.864264Z 00O   feature flags: FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true, FF_MACHINE_OPTIONS_EXPAND_ENV:true, FF_DOCKER_MACHINE_JSON_OUTPUT:true
2026-10-12T04:21:04.864288Z 00O Resolving secrets
2026-10-12T04:21:04.864410Z 00O section_start:1791778864:prepare_executor

2026-10-12T04:21:04.864415Z 00O+Preparing the "docker+machine" executor
2026-10-12T04:21:04.935786Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san ...
2026-10-12T04:21:04.935834Z 00O Using helper image:  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501  (overridden, default would be  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 )
2026-10-12T04:21:04.935843Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501
2026-10-12T04:21:04.936405Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-10-12T04:21:04.936411Z 00O Pulling docker image registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 ...
2026-10-12T04:21:06.351549Z 00O Using docker image sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837 for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:eea1152121f06d47f94871fef69559be0a87c75212f227e34e7617d1a3bbe6c3 ...
2026-10-12T04:21:07.985630Z 00O Using helper image:  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501  (overridden, default would be  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 )
2026-10-12T04:21:07.985643Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501
2026-10-12T04:21:07.986509Z 00O Using docker image sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837 for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:eea1152121f06d47f94871fef69559be0a87c75212f227e34e7617d1a3bbe6c3 ...
2026-10-12T04:21:07.986519Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san
2026-10-12T04:21:07.987150Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-10-12T04:21:07.987158Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san ...
2026-10-12T04:21:25.077942Z 00O Using docker image sha256:a9b90646b1fa8c7d35e5d1466f463458d3753c184e845a3bf8726eded8acfc0e for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san@sha256:f459da324cef3274e7159d7b290f115407f59faee657bd8fcf3d50da3e372247 ...
2026-10-12T04:21:25.078026Z 00O section_end:1791778885:prepare_executor

2026-10-12T04:21:25.078132Z 00O+section_start:1791778885:prepare_script

2026-10-12T04:21:25.078136Z 00O+Preparing environment
2026-10-12T04:21:25.078167Z 00O Using helper image:  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501  (overridden, default would be  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 )
2026-10-12T04:21:25.078178Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501
2026-10-12T04:21:25.079054Z 00O Using docker image sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837 for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:eea1152121f06d47f94871fef69559be0a87c75212f227e34e7617d1a3bbe6c3 ...
2026-10-12T04:21:25.079067Z 00O Using effective pull policy of [always] for container sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837
2026-10-12T04:21:31.812998Z 01O Running on runner-j8vtlrhes-project-3622566-concurrent-0 via runner-j8vtlrhes-s-l-m-amd64-1791778815-c155d4e3...
2026-10-12T04:21:31.815875Z 01O Running on CPU: INTEL(R) XEON(R) PLATINUM 8581C CPU @ 2.10GHz (avx, avx2, avx512f)
2026-10-12T04:21:31.955469Z 00O section_end:1791778891:prepare_script

2026-10-12T04:21:31.955840Z 00O+section_start:1791778891:get_sources

2026-10-12T04:21:31.955844Z 00O+Getting source from Git repository
2026-10-12T04:21:32.246691Z 01O Gitaly correlation ID: b7440df87aa14e389b1673f7eafbec0c
2026-10-12T04:21:32.251273Z 01O Fetching changes...
2026-10-12T04:21:32.253666Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/
2026-10-12T04:21:32.255319Z 01O Created fresh repository.
2026-10-12T04:21:37.626509Z 01O Checking out df59dd63 as detached HEAD (ref is master)...
2026-10-12T04:21:37.790462Z 01O 
2026-10-12T04:21:37.790467Z 01O Skipping Git submodules setup
2026-10-12T04:21:37.790469Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping'
2026-10-12T04:21:37.969969Z 00O section_end:1791778897:get_sources

2026-10-12T04:21:37.970408Z 00O+section_start:1791778897:download_artifacts

2026-10-12T04:21:37.970414Z 00O+Downloading artifacts
2026-10-12T04:21:38.292991Z 01O Downloading artifacts for build (17100991411)...
2026-10-12T04:21:38.529584Z 01E Direct download from storage.googleapis.com         correlation_id=cc537effb4894d5bafed654758fca490 id=17100991411 status=302 token=74_UjACzJ
2026-10-12T04:21:38.689787Z 01E Downloading artifacts from coordinator... ok        correlation_id=cc537effb4894d5bafed654758fca490 id=17100991411 status=302 token=74_UjACzJ
2026-10-12T04:21:38.698268Z 01O Downloading artifacts for mirror-packages (17100991410)...
2026-10-12T04:21:38.872940Z 01E Direct download from storage.googleapis.com         correlation_id=85475d11c2714f48b69e0f8f1afe085c id=17100991410 status=302 token=74_UjACzJ
2026-10-12T04:21:39.475751Z 01E Downloading artifacts from coordinator... ok        correlation_id=85475d11c2714f48b69e0f8f1afe085c id=17100991410 status=302 token=74_UjACzJ
2026-10-12T04:21:40.554810Z 00O section_end:1791778900:download_artifacts

2026-10-12T04:21:40.555133Z 00O+section_start:1791778900:step_script

2026-10-12T04:21:40.555140Z 00O+Executing "step_script" stage of the job script
2026-10-12T04:21:40.555151Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san
2026-10-12T04:21:40.556110Z 00O Using docker image sha256:a9b90646b1fa8c7d35e5d1466f463458d3753c184e845a3bf8726eded8acfc0e for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san@sha256:f459da324cef3274e7159d7b290f115407f59faee657bd8fcf3d50da3e372247 ...
2026-10-12T04:21:40.839761Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) .
2026-10-12T04:21:40.846292Z 01O $ mkdir -p ~/.R
2026-10-12T04:21:40.847337Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)'
2026-10-12T04:21:41.471066Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’
2026-10-12T04:21:41.471074Z 01E 
2026-10-12T04:25:02.454350Z 01E Updating HTML index of packages in '.Library'
2026-10-12T04:25:02.456390Z 01E Making 'packages.html' ... done
2026-10-12T04:25:02.485150Z 01O $ res1=0; ASAN_OPTIONS=detect_leaks=1 R CMD check --no-manual $(ls -1t data.table_*.tar.gz | head -n 1) || res1=$? # collapsed multi-line command
2026-10-12T04:25:03.793319Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’
2026-10-12T04:25:03.793853Z 01O * using R Under development (unstable) (2026-10-10 r90659)
2026-10-12T04:25:03.794629Z 01O * using platform: x86_64-pc-linux-gnu
2026-10-12T04:25:03.795125Z 01O * R was compiled by
2026-10-12T04:25:03.795471Z 01O     gcc (Debian 16.2.0-3) 16.2.0
2026-10-12T04:25:03.795472Z 01O     GNU Fortran (Debian 16.2.0-3) 16.2.0
2026-10-12T04:25:03.796031Z 01O * running under: Debian GNU/Linux forky/sid
2026-10-12T04:25:03.796573Z 01O * using session charset: UTF-8
2026-10-12T04:25:03.798314Z 01O * current time: 2026-10-12 04:25:03 UTC
2026-10-12T04:25:05.671232Z 01O * using option ‘--no-manual’
2026-10-12T04:25:05.672336Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK
2026-10-12T04:25:05.681481Z 01O * this is package ‘data.table’ version ‘1.18.99’
2026-10-12T04:25:05.682030Z 01O * package encoding: UTF-8
2026-10-12T04:25:05.682646Z 01O * checking package namespace information ... OK
2026-10-12T04:25:05.718416Z 01O * checking package dependencies ... OK
2026-10-12T04:25:08.138265Z 01O * checking if this is a source package ... OK
2026-10-12T04:25:08.143042Z 01O * checking if there is a namespace ... OK
2026-10-12T04:25:08.148641Z 01O * checking for .dll and .exe files ... OK
2026-10-12T04:25:08.150049Z 01O * checking for hidden files and directories ... OK
2026-10-12T04:25:08.153522Z 01O * checking for portable file names ... OK
2026-10-12T04:25:08.168520Z 01O * checking for sufficient/correct file permissions ... OK
2026-10-12T04:25:08.171211Z 01O * checking whether package ‘data.table’ can be installed ... OK
2026-10-12T04:26:07.804770Z 01O * used C compiler: ‘gcc (Debian 16.2.0-3) 16.2.0’
2026-10-12T04:26:07.805774Z 01O * checking installed package size ... INFO
2026-10-12T04:26:07.811049Z 01O   installed size is 15.8Mb
2026-10-12T04:26:07.812905Z 01O   sub-directories of 1Mb or more:
2026-10-12T04:26:07.814439Z 01O     doc     1.1Mb
2026-10-12T04:26:07.814440Z 01O     libs    9.4Mb
2026-10-12T04:26:07.814441Z 01O     po      1.7Mb
2026-10-12T04:26:07.814441Z 01O     tests   2.2Mb
2026-10-12T04:26:07.815043Z 01O * checking package directory ... OK
2026-10-12T04:26:07.816116Z 01O * checking ‘build’ directory ... OK
2026-10-12T04:26:07.818332Z 01O * checking DESCRIPTION meta-information ... OK
2026-10-12T04:26:09.935068Z 01O * checking top-level files ... OK
2026-10-12T04:26:09.937038Z 01O * checking for left-over files ... OK
2026-10-12T04:26:09.942750Z 01O * checking index information ... OK
2026-10-12T04:26:10.533320Z 01O * checking package subdirectories ... OK
2026-10-12T04:26:11.708462Z 01O * checking code files for non-ASCII characters ... OK
2026-10-12T04:26:11.868987Z 01O * checking R files for syntax errors ... OK
2026-10-12T04:26:12.151160Z 01O * checking whether the package can be loaded ... OK
2026-10-12T04:26:12.757785Z 01O * checking whether the package can be loaded with stated dependencies ... OK
2026-10-12T04:26:13.280529Z 01O * checking whether the package can be unloaded cleanly ... OK
2026-10-12T04:26:13.786960Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK
2026-10-12T04:26:14.294829Z 01O * checking whether the namespace can be unloaded cleanly ... OK
2026-10-12T04:26:14.903933Z 01O * checking loading without being on the library search path ... OK
2026-10-12T04:26:16.118194Z 01O * checking whether startup messages can be suppressed ... OK
2026-10-12T04:26:16.718413Z 01O * checking dependencies in R code ... OK
2026-10-12T04:26:18.864865Z 01O * checking S3 generic/method consistency ... OK
2026-10-12T04:26:19.909342Z 01O * checking replacement functions ... OK
2026-10-12T04:26:20.486531Z 01O * checking foreign function calls ... OK
2026-10-12T04:26:22.593478Z 01O * checking R code for possible problems ... OK
2026-10-12T04:26:58.486877Z 01O * checking Rd files ... OK
2026-10-12T04:27:00.548524Z 01O * checking Rd metadata ... OK
2026-10-12T04:27:00.688047Z 01O * checking Rd cross-references ... OK
2026-10-12T04:27:01.531422Z 01O * checking for missing documentation entries ... OK
2026-10-12T04:27:02.232877Z 01O * checking for code/documentation mismatches ... OK
2026-10-12T04:27:05.239870Z 01O * checking Rd \usage sections ... OK
2026-10-12T04:27:07.970493Z 01O * checking Rd contents ... OK
2026-10-12T04:27:09.278803Z 01O * checking for unstated dependencies in examples ... OK
2026-10-12T04:27:10.563555Z 01O * checking line endings in shell scripts ... OK
2026-10-12T04:27:10.564838Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK
2026-10-12T04:27:10.613946Z 01O * checking line endings in Makefiles ... OK
2026-10-12T04:27:10.615145Z 01O * checking compilation flags in Makevars ... OK
2026-10-12T04:27:10.758982Z 01O * checking for GNU extensions in Makefiles ... OK
2026-10-12T04:27:10.760894Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
2026-10-12T04:27:10.773323Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK
2026-10-12T04:27:10.782245Z 01O * checking compiled code ... OK
2026-10-12T04:27:13.431899Z 01O * checking installed files from ‘inst/doc’ ... OK
2026-10-12T04:27:14.088545Z 01O * checking files in ‘vignettes’ ... OK
2026-10-12T04:27:14.758143Z 01O * checking examples ... OK
2026-10-12T04:27:22.010172Z 01O * checking for unstated dependencies in ‘tests’ ... OK
2026-10-12T04:27:22.216977Z 01O * checking tests ...
2026-10-12T04:27:22.612487Z 01O   Running ‘autoprint.R’
2026-10-12T04:27:23.318149Z 01O   Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
2026-10-12T04:27:23.332635Z 01O   Running ‘froll.R’
2026-10-12T04:49:38.103310Z 01O   Running ‘litedown.R’
2026-10-12T04:49:39.064819Z 01O   Running ‘main.R’
2026-10-12T04:51:43.475186Z 01O   Running ‘mergelist.R’
2026-10-12T04:51:48.309968Z 01O   Running ‘nafill.R’
2026-10-12T04:51:49.896224Z 01O   Running ‘optimize.R’
2026-10-12T04:51:53.961780Z 01O   Running ‘other.R’
2026-10-12T04:51:54.655947Z 01O   Running ‘programming.R’
2026-10-12T04:51:56.402242Z 01O   Running ‘S4.R’
2026-10-12T04:51:57.435296Z 01O   Running ‘self.R’
2026-10-12T04:51:58.195983Z 01O   Running ‘types.R’
2026-10-12T04:51:59.078117Z 01O  OK
2026-10-12T04:51:59.811876Z 01O * checking for unstated dependencies in vignettes ... OK
2026-10-12T04:52:00.800739Z 01O * checking package vignettes ... OK
2026-10-12T04:52:03.701202Z 01O * checking re-building of vignette outputs ... OK
2026-10-12T04:53:22.998064Z 01O * DONE
2026-10-12T04:53:22.999152Z 01E 
2026-10-12T04:53:22.999310Z 01O Status: OK
2026-10-12T04:53:22.999640Z 01E 
2026-10-12T04:53:23.453136Z 00O section_end:1791780803:step_script

2026-10-12T04:53:23.453401Z 00O+section_start:1791780803:after_script

2026-10-12T04:53:23.453406Z 00O+Running after_script
2026-10-12T04:53:23.736465Z 01O Running after script...
2026-10-12T04:53:23.736489Z 01O $ mkdir -p bus/$CI_JOB_NAME
2026-10-12T04:53:23.737387Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id
2026-10-12T04:53:23.737388Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status
2026-10-12T04:53:23.737420Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image
2026-10-12T04:53:23.737420Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/
2026-10-12T04:53:23.870240Z 00O section_end:1791780803:after_script

2026-10-12T04:53:23.870686Z 00O+section_start:1791780803:upload_artifacts_on_success

2026-10-12T04:53:23.870691Z 00O+Uploading artifacts for successful job
2026-10-12T04:53:24.193991Z 01O Uploading artifacts...
2026-10-12T04:53:24.240786Z 01E bus/test-lin-dev-gcc-san: found 714 matching artifact files and directories 
2026-10-12T04:53:25.766548Z 01E Uploading artifacts as "archive" to coordinator... 201 Created  correlation_id=b1583a6c7db84bb6a17853d2a6a39898 id=17100991419 status=201 token=74_UjACzJ
2026-10-12T04:53:25.915024Z 00O section_end:1791780805:upload_artifacts_on_success

2026-10-12T04:53:25.915347Z 00O+section_start:1791780805:cleanup_file_variables

2026-10-12T04:53:25.915352Z 00O+Cleaning up project directory and file based variables
2026-10-12T04:53:26.355468Z 00O section_end:1791780806:cleanup_file_variables

2026-10-12T04:53:26.383910Z 00O Job succeeded