2026-07-13T04:20:57.929722Z 00O Running with gitlab-runner 19.0.0~pre.1138.ga0a1e0e8 (a0a1e0e8)
2026-07-13T04:20:57.929732Z 00O   on blue-5.saas-linux-medium-amd64.runners-manager.gitlab.com/default nEW2M-oDE, system ID: s_fe9b8d77dc4b
2026-07-13T04:20:57.929737Z 00O   feature flags: FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true
2026-07-13T04:20:57.929753Z 00O Resolving secrets
2026-07-13T04:20:57.929876Z 00O section_start:1783916457:prepare_executor
2026-07-13T04:20:57.929877Z 00O+Preparing the "docker+machine" executor
2026-07-13T04:20:58.058253Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-07-13T04:21:01.905820Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-07-13T04:21:01.906281Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-07-13T04:21:01.906291Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-07-13T04:21:18.832950Z 00O Using docker image sha256:9e831859d587ce8a8628e7d8c034cdf4f44b68353d34d38f8449373cf7a8a4a6 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:e267e01b69d18c6d106706466b33eb99ab125163a7bf017c36bd1b835dffc36f ...
2026-07-13T04:21:18.833029Z 00O section_end:1783916478:prepare_executor
2026-07-13T04:21:18.833030Z 00O+section_start:1783916478:prepare_script
2026-07-13T04:21:18.833126Z 00O+Preparing environment
2026-07-13T04:21:18.833829Z 00O Using effective pull policy of [always] for container sha256:3bc6e8b73e6fa960cfcf5be42a75e8f352931c2f3064322c69773d20e6ec3581
2026-07-13T04:21:23.945021Z 01O Running on runner-new2m-ode-project-3622566-concurrent-0 via runner-new2m-ode-s-l-m-amd64-1783916326-2e2ae317...
2026-07-13T04:21:24.089192Z 00O section_end:1783916484:prepare_script
2026-07-13T04:21:24.089198Z 00O+section_start:1783916484:get_sources
2026-07-13T04:21:24.089716Z 00O+Getting source from Git repository
2026-07-13T04:21:24.408533Z 01O Gitaly correlation ID: 2cbacd3306aa4fe2adf91a23c6e83cab
2026-07-13T04:21:24.413726Z 01O Fetching changes...
2026-07-13T04:21:24.416335Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/
2026-07-13T04:21:24.418120Z 01O Created fresh repository.
2026-07-13T04:21:29.916206Z 01O Checking out f55ed355 as detached HEAD (ref is master)...
2026-07-13T04:21:30.092493Z 01O 
2026-07-13T04:21:30.092496Z 01O Skipping Git submodules setup
2026-07-13T04:21:30.092517Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping'
2026-07-13T04:21:30.271467Z 00O section_end:1783916490:get_sources
2026-07-13T04:21:30.271470Z 00O+section_start:1783916490:download_artifacts
2026-07-13T04:21:30.272168Z 00O+Downloading artifacts
2026-07-13T04:21:30.605583Z 01O Downloading artifacts for build (15308171288)...
2026-07-13T04:21:30.808762Z 01E Direct download from storage.googleapis.com         correlation_id=e35fced0ccd3462ab909e6be47fda57b id=15308171288 status=302 token=71_KXVqsr
2026-07-13T04:21:31.149692Z 01E Downloading artifacts from coordinator... ok        correlation_id=e35fced0ccd3462ab909e6be47fda57b id=15308171288 status=302 token=71_KXVqsr
2026-07-13T04:21:31.163545Z 01O Downloading artifacts for mirror-packages (15308171287)...
2026-07-13T04:21:31.407743Z 01E Direct download from storage.googleapis.com         correlation_id=f9e5ca673f8144539530b9edcc31973a id=15308171287 status=302 token=71_KXVqsr
2026-07-13T04:21:31.961618Z 01E Downloading artifacts from coordinator... ok        correlation_id=f9e5ca673f8144539530b9edcc31973a id=15308171287 status=302 token=71_KXVqsr
2026-07-13T04:21:33.192241Z 00O section_end:1783916493:download_artifacts
2026-07-13T04:21:33.192246Z 00O+section_start:1783916493:step_script
2026-07-13T04:21:33.192699Z 00O+Executing "step_script" stage of the job script
2026-07-13T04:21:33.192716Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-07-13T04:21:33.193666Z 00O Using docker image sha256:9e831859d587ce8a8628e7d8c034cdf4f44b68353d34d38f8449373cf7a8a4a6 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:e267e01b69d18c6d106706466b33eb99ab125163a7bf017c36bd1b835dffc36f ...
2026-07-13T04:21:33.491847Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) .
2026-07-13T04:21:33.498742Z 01O $ mkdir -p ~/.R
2026-07-13T04:21:33.499880Z 01O $ echo 'CFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' > ~/.R/Makevars
2026-07-13T04:21:33.499949Z 01O $ echo 'CXXFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' >> ~/.R/Makevars
2026-07-13T04:21:33.499952Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)'
2026-07-13T04:21:33.803959Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’
2026-07-13T04:21:33.803967Z 01E 
2026-07-13T04:23:35.867666Z 01E Updating HTML index of packages in '.Library'
2026-07-13T04:23:35.868050Z 01E Making 'packages.html' ... done
2026-07-13T04:23:35.880298Z 01O $ R CMD check --as-cran $(ls -1t data.table_*.tar.gz | head -n 1)
2026-07-13T04:23:36.965453Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’
2026-07-13T04:23:36.965470Z 01O * using R Under development (unstable) (2026-07-11 r90235)
2026-07-13T04:23:36.965719Z 01O * using platform: x86_64-pc-linux-gnu
2026-07-13T04:23:36.965883Z 01O * R was compiled by
2026-07-13T04:23:36.966045Z 01O     gcc (Debian 15.3.0-1) 15.3.0
2026-07-13T04:23:36.966046Z 01O     GNU Fortran (Debian 15.3.0-1) 15.3.0
2026-07-13T04:23:36.966313Z 01O * running under: Debian GNU/Linux forky/sid
2026-07-13T04:23:36.966582Z 01O * using session charset: UTF-8
2026-07-13T04:23:36.967176Z 01O * current time: 2026-07-13 04:23:36 UTC
2026-07-13T04:23:38.996834Z 01O * using option ‘--as-cran’
2026-07-13T04:23:38.997105Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK
2026-07-13T04:23:39.000359Z 01O * this is package ‘data.table’ version ‘1.18.99’
2026-07-13T04:23:39.000552Z 01O * package encoding: UTF-8
2026-07-13T04:23:39.000905Z 01O * checking CRAN incoming feasibility ... OK
2026-07-13T04:23:40.096275Z 01O * checking package namespace information ... OK
2026-07-13T04:23:40.184258Z 01O * checking package dependencies ... OK
2026-07-13T04:23:41.509373Z 01O * checking if this is a source package ... OK
2026-07-13T04:23:41.511712Z 01O * checking if there is a namespace ... OK
2026-07-13T04:23:41.515415Z 01O * checking for .dll and .exe files ... OK
2026-07-13T04:23:41.515911Z 01O * checking for hidden files and directories ... OK
2026-07-13T04:23:41.517793Z 01O * checking for portable file names ... OK
2026-07-13T04:23:41.521962Z 01O * checking for sufficient/correct file permissions ... OK
2026-07-13T04:23:41.526700Z 01O * checking whether package ‘data.table’ can be installed ... [43s/28s] OK
2026-07-13T04:24:09.420970Z 01O * used C compiler: ‘gcc (Debian 15.3.0-1) 15.3.0’
2026-07-13T04:24:09.421321Z 01O * checking installed package size ... INFO
2026-07-13T04:24:09.424743Z 01O   installed size is  8.6Mb
2026-07-13T04:24:09.425577Z 01O   sub-directories of 1Mb or more:
2026-07-13T04:24:09.426238Z 01O     doc     1.1Mb
2026-07-13T04:24:09.426239Z 01O     libs    2.2Mb
2026-07-13T04:24:09.426239Z 01O     po      1.7Mb
2026-07-13T04:24:09.426240Z 01O     tests   2.2Mb
2026-07-13T04:24:09.437447Z 01O * checking package directory ... OK
2026-07-13T04:24:09.437845Z 01O * checking for future file timestamps ... OK
2026-07-13T04:24:09.438588Z 01O * checking ‘build’ directory ... OK
2026-07-13T04:24:09.439713Z 01O * checking DESCRIPTION meta-information ... OK
2026-07-13T04:24:10.872726Z 01O * checking top-level files ... OK
2026-07-13T04:24:12.180634Z 01O * checking for left-over files ... OK
2026-07-13T04:24:12.183528Z 01O * checking index information ... OK
2026-07-13T04:24:12.379697Z 01O * checking package subdirectories ... OK
2026-07-13T04:24:12.851734Z 01O * checking code files for non-ASCII characters ... OK
2026-07-13T04:24:12.902607Z 01O * checking R files for syntax errors ... OK
2026-07-13T04:24:12.985860Z 01O * checking whether the package can be loaded ... OK
2026-07-13T04:24:13.277237Z 01O * checking whether the package can be loaded with stated dependencies ... OK
2026-07-13T04:24:13.475325Z 01O * checking whether the package can be unloaded cleanly ... OK
2026-07-13T04:24:13.674352Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK
2026-07-13T04:24:13.876667Z 01O * checking whether the namespace can be unloaded cleanly ... OK
2026-07-13T04:24:14.169000Z 01O * checking loading without being on the library search path ... OK
2026-07-13T04:24:14.752790Z 01O * checking whether startup messages can be suppressed ... OK
2026-07-13T04:24:15.035488Z 01O * checking use of S3 registration ... OK
2026-07-13T04:24:15.066820Z 01O * checking dependencies in R code ... OK
2026-07-13T04:24:16.751420Z 01O * checking S3 generic/method consistency ... OK
2026-07-13T04:24:17.260140Z 01O * checking replacement functions ... OK
2026-07-13T04:24:17.477606Z 01O * checking foreign function calls ... OK
2026-07-13T04:24:19.447912Z 01O * checking R code for possible problems ... [41s/41s] OK
2026-07-13T04:25:00.595260Z 01O * checking Rd files ... OK
2026-07-13T04:25:01.998729Z 01O * checking Rd metadata ... OK
2026-07-13T04:25:02.046149Z 01O * checking Rd line widths ... OK
2026-07-13T04:25:02.537768Z 01O * checking Rd cross-references ... OK
2026-07-13T04:25:03.615276Z 01O * checking for missing documentation entries ... OK
2026-07-13T04:25:03.973495Z 01O * checking for code/documentation mismatches ... OK
2026-07-13T04:25:05.349010Z 01O * checking Rd \usage sections ... OK
2026-07-13T04:25:06.594986Z 01O * checking Rd contents ... OK
2026-07-13T04:25:07.493959Z 01O * checking for unstated dependencies in examples ... OK
2026-07-13T04:25:08.264252Z 01O * checking line endings in shell scripts ... OK
2026-07-13T04:25:08.264759Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK
2026-07-13T04:25:08.281188Z 01O * checking line endings in Makefiles ... OK
2026-07-13T04:25:08.281667Z 01O * checking compilation flags in Makevars ... OK
2026-07-13T04:25:08.339354Z 01O * checking for GNU extensions in Makefiles ... OK
2026-07-13T04:25:08.340570Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
2026-07-13T04:25:08.342444Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK
2026-07-13T04:25:08.345653Z 01O * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
2026-07-13T04:25:08.350850Z 01O * checking pragmas in C/C++ headers and code ... OK
2026-07-13T04:25:08.368889Z 01O * checking compilation flags used ... OK
2026-07-13T04:25:08.370628Z 01O * checking compiled code ... OK
2026-07-13T04:25:08.450125Z 01O * checking installed files from ‘inst/doc’ ... OK
2026-07-13T04:25:08.691951Z 01O * checking files in ‘vignettes’ ... OK
2026-07-13T04:25:09.884474Z 01O * checking examples ... OK
2026-07-13T04:25:17.294324Z 01O * checking examples with --run-donttest ... OK
2026-07-13T04:25:27.690934Z 01O * checking for unstated dependencies in ‘tests’ ... OK
2026-07-13T04:25:27.769180Z 01O * checking tests ...
2026-07-13T04:25:27.951041Z 01O   Running ‘autoprint.R’
2026-07-13T04:25:28.311450Z 01O   Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
2026-07-13T04:25:28.317418Z 01O   Running ‘froll.R’ [21m/21m]
2026-07-13T04:46:14.447974Z 01O   Running ‘litedown.R’
2026-07-13T04:46:14.922204Z 01O   Running ‘main.R’ [206s/201s]
2026-07-13T04:49:35.891599Z 01O   Running ‘mergelist.R’
2026-07-13T04:49:39.118923Z 01O   Running ‘nafill.R’
2026-07-13T04:49:40.034127Z 01O   Running ‘optimize.R’
2026-07-13T04:49:42.772156Z 01O   Running ‘other.R’
2026-07-13T04:49:43.069604Z 01O   Running ‘programming.R’
2026-07-13T04:49:44.062748Z 01O   Running ‘S4.R’
2026-07-13T04:49:44.578546Z 01O   Running ‘types.R’
2026-07-13T04:49:44.950226Z 01O  [25m/24m] OK
2026-07-13T04:49:45.147387Z 01O * checking for unstated dependencies in vignettes ... OK
2026-07-13T04:49:45.534500Z 01O * checking package vignettes ... OK
2026-07-13T04:49:46.096766Z 01O * checking re-building of vignette outputs ... [34s/34s] OK
2026-07-13T04:50:20.567277Z 01O * checking PDF version of manual ... OK
2026-07-13T04:50:28.031179Z 01O * checking HTML version of manual ... [15s/15s] NOTE
2026-07-13T04:50:43.087350Z 01O Skipping checking math rendering: package 'V8' unavailable
2026-07-13T04:50:43.087626Z 01O * checking for non-standard things in the check directory ... OK
2026-07-13T04:50:43.088150Z 01O * checking for detritus in the temp directory ... OK
2026-07-13T04:50:43.088837Z 01O * DONE
2026-07-13T04:50:43.089150Z 01E 
2026-07-13T04:50:43.089276Z 01O Status: 1 NOTE
2026-07-13T04:50:43.089484Z 01E See
2026-07-13T04:50:43.089484Z 01E   ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’
2026-07-13T04:50:43.089485Z 01E for details.
2026-07-13T04:50:43.089595Z 01E 
2026-07-13T04:50:43.102343Z 01O $ (! grep "warning:" data.table.Rcheck/00install.out)
2026-07-13T04:50:43.104296Z 01O $ Rscript -e 'l=tail(readLines("data.table.Rcheck/00check.log"), 1L); notes<-"Status: 1 NOTE"; if (!identical(l, notes)) stop("Last line of ", shQuote("00check.log"), " is not ", shQuote(notes), " (V8 package) but ", shQuote(l)) else q("no")'
2026-07-13T04:50:43.438132Z 00O section_end:1783918243:step_script
2026-07-13T04:50:43.438136Z 00O+section_start:1783918243:after_script
2026-07-13T04:50:43.438534Z 00O+Running after_script
2026-07-13T04:50:43.740600Z 01O Running after script...
2026-07-13T04:50:43.740621Z 01O $ mkdir -p bus/$CI_JOB_NAME
2026-07-13T04:50:43.741579Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id
2026-07-13T04:50:43.741636Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status
2026-07-13T04:50:43.741636Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image
2026-07-13T04:50:43.741641Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/
2026-07-13T04:50:43.885722Z 00O section_end:1783918243:after_script
2026-07-13T04:50:43.885726Z 00O+section_start:1783918243:upload_artifacts_on_success
2026-07-13T04:50:43.886437Z 00O+Uploading artifacts for successful job
2026-07-13T04:50:44.223962Z 01O Uploading artifacts...
2026-07-13T04:50:44.272571Z 01E bus/test-lin-dev-gcc-strict-cran: found 716 matching artifact files and directories 
2026-07-13T04:50:46.354307Z 01E Uploading artifacts as "archive" to coordinator... 201 Created  correlation_id=e9847ad734c949ab89d9a4357be0c8ac id=15308171292 status=201 token=71_KXVqsr
2026-07-13T04:50:46.506746Z 00O section_end:1783918246:upload_artifacts_on_success
2026-07-13T04:50:46.506751Z 00O+section_start:1783918246:cleanup_file_variables
2026-07-13T04:50:46.506846Z 00O+Cleaning up project directory and file based variables
2026-07-13T04:50:46.945359Z 00O section_end:1783918246:cleanup_file_variables
2026-07-13T04:50:46.945363Z 00O+
2026-07-13T04:50:46.972521Z 00O Job succeeded