2026-05-29T04:21:19.355820Z 00O Running with gitlab-runner 19.0.0~pre.1138.ga0a1e0e8 (a0a1e0e8)
2026-05-29T04:21:19.355834Z 00O   on blue-4.saas-linux-medium-amd64.runners-manager.gitlab.com/default DS1-6aDu5, system ID: s_eacbc5a4b586
2026-05-29T04:21:19.355840Z 00O   feature flags: FF_USE_GIT_PROACTIVE_AUTH:true
2026-05-29T04:21:19.355859Z 00O Resolving secrets
2026-05-29T04:21:19.355974Z 00O section_start:1780028479:prepare_executor
2026-05-29T04:21:19.355975Z 00O+Preparing the "docker+machine" executor
2026-05-29T04:21:19.482204Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-05-29T04:21:23.315739Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-05-29T04:21:23.316278Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-05-29T04:21:23.316287Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-05-29T04:21:41.118643Z 00O Using docker image sha256:74a6671308f85ea6d9735dc124caaeab3b3380e74983719067f4e2a737625ea0 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:0bb7e29d1b75aba6c2b077052b18d849905f632c8eba335940d450b405bdbf8c ...
2026-05-29T04:21:41.118730Z 00O section_end:1780028501:prepare_executor
2026-05-29T04:21:41.118732Z 00O+section_start:1780028501:prepare_script
2026-05-29T04:21:41.118814Z 00O+Preparing environment
2026-05-29T04:21:41.119653Z 00O Using effective pull policy of [always] for container sha256:f8dcdca8edc12c916141e89391d2af9125d912e8fb81c357d2806d7e2734d4ae
2026-05-29T04:21:45.683589Z 01O Running on runner-ds1-6adu5-project-3622566-concurrent-0 via runner-ds1-6adu5-s-l-m-amd64-1780028409-9e803e96...
2026-05-29T04:21:45.819817Z 00O section_end:1780028505:prepare_script
2026-05-29T04:21:45.819822Z 00O+section_start:1780028505:get_sources
2026-05-29T04:21:45.820367Z 00O+Getting source from Git repository
2026-05-29T04:21:46.138333Z 01O Gitaly correlation ID: b2d331e70ae94bcfac76b8c5c84b4d70
2026-05-29T04:21:46.143429Z 01O Fetching changes...
2026-05-29T04:21:46.146186Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/
2026-05-29T04:21:46.148069Z 01O Created fresh repository.
2026-05-29T04:21:51.513350Z 01O Checking out 1b998b10 as detached HEAD (ref is master)...
2026-05-29T04:21:51.688418Z 01O 
2026-05-29T04:21:51.688424Z 01O Skipping Git submodules setup
2026-05-29T04:21:51.688425Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping'
2026-05-29T04:21:51.875404Z 00O section_end:1780028511:get_sources
2026-05-29T04:21:51.875408Z 00O+section_start:1780028511:download_artifacts
2026-05-29T04:21:51.876144Z 00O+Downloading artifacts
2026-05-29T04:21:52.209823Z 01O Downloading artifacts for mirror-packages (14595616712)...
2026-05-29T04:21:52.372367Z 01E Direct download from storage.googleapis.com         correlation_id=d2ccd26e36594779b8b1ea49c1f6bda5 id=14595616712 status=302 token=6f_Mz4Ry3
2026-05-29T04:21:52.798752Z 01E Downloading artifacts from coordinator... ok        correlation_id=d2ccd26e36594779b8b1ea49c1f6bda5 id=14595616712 status=302 token=6f_Mz4Ry3
2026-05-29T04:21:53.248271Z 01O Downloading artifacts for build (14595616713)...
2026-05-29T04:21:53.459349Z 01E Direct download from storage.googleapis.com         correlation_id=34752813158049f190210c278c2a00f2 id=14595616713 status=302 token=6f_Mz4Ry3
2026-05-29T04:21:53.631955Z 01E Downloading artifacts from coordinator... ok        correlation_id=34752813158049f190210c278c2a00f2 id=14595616713 status=302 token=6f_Mz4Ry3
2026-05-29T04:21:54.276035Z 00O section_end:1780028514:download_artifacts
2026-05-29T04:21:54.276041Z 00O+section_start:1780028514:step_script
2026-05-29T04:21:54.276460Z 00O+Executing "step_script" stage of the job script
2026-05-29T04:21:54.276479Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-05-29T04:21:54.277378Z 00O Using docker image sha256:74a6671308f85ea6d9735dc124caaeab3b3380e74983719067f4e2a737625ea0 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:0bb7e29d1b75aba6c2b077052b18d849905f632c8eba335940d450b405bdbf8c ...
2026-05-29T04:21:54.577422Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) .
2026-05-29T04:21:54.583854Z 01O $ mkdir -p ~/.R
2026-05-29T04:21:54.584956Z 01O $ echo 'CFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' > ~/.R/Makevars
2026-05-29T04:21:54.584961Z 01O $ echo 'CXXFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' >> ~/.R/Makevars
2026-05-29T04:21:54.585051Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)'
2026-05-29T04:21:54.899043Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’
2026-05-29T04:21:54.899050Z 01E 
2026-05-29T04:24:01.195922Z 01E Updating HTML index of packages in '.Library'
2026-05-29T04:24:01.196766Z 01E Making 'packages.html' ... done
2026-05-29T04:24:01.208993Z 01O $ R CMD check --as-cran $(ls -1t data.table_*.tar.gz | head -n 1)
2026-05-29T04:24:02.398673Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’
2026-05-29T04:24:02.398853Z 01O * using R Under development (unstable) (2026-05-27 r90083)
2026-05-29T04:24:02.399001Z 01O * using platform: x86_64-pc-linux-gnu
2026-05-29T04:24:02.399193Z 01O * R was compiled by
2026-05-29T04:24:02.399337Z 01O     gcc (Debian 15.2.0-17) 15.2.0
2026-05-29T04:24:02.399337Z 01O     GNU Fortran (Debian 15.2.0-17) 15.2.0
2026-05-29T04:24:02.399585Z 01O * running under: Debian GNU/Linux forky/sid
2026-05-29T04:24:02.399797Z 01O * using session charset: UTF-8
2026-05-29T04:24:02.400485Z 01O * current time: 2026-05-29 04:24:02 UTC
2026-05-29T04:24:04.574551Z 01O * using option ‘--as-cran’
2026-05-29T04:24:04.574918Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK
2026-05-29T04:24:04.577730Z 01O * this is package ‘data.table’ version ‘1.18.99’
2026-05-29T04:24:04.577947Z 01O * package encoding: UTF-8
2026-05-29T04:24:04.578237Z 01O * checking CRAN incoming feasibility ... OK
2026-05-29T04:24:05.749863Z 01O * checking package namespace information ... OK
2026-05-29T04:24:05.759718Z 01O * checking package dependencies ... OK
2026-05-29T04:24:07.079784Z 01O * checking if this is a source package ... OK
2026-05-29T04:24:07.082426Z 01O * checking if there is a namespace ... OK
2026-05-29T04:24:07.086202Z 01O * checking for .dll and .exe files ... OK
2026-05-29T04:24:07.086742Z 01O * checking for hidden files and directories ... OK
2026-05-29T04:24:07.088696Z 01O * checking for portable file names ... OK
2026-05-29T04:24:07.093183Z 01O * checking for sufficient/correct file permissions ... OK
2026-05-29T04:24:07.099691Z 01O * checking whether package ‘data.table’ can be installed ... [43s/29s] OK
2026-05-29T04:24:36.316826Z 01O * used C compiler: ‘gcc (Debian 15.2.0-17) 15.2.0’
2026-05-29T04:24:36.317140Z 01O * checking installed package size ... INFO
2026-05-29T04:24:36.320668Z 01O   installed size is  8.6Mb
2026-05-29T04:24:36.414919Z 01O   sub-directories of 1Mb or more:
2026-05-29T04:24:36.415483Z 01O     doc     1.1Mb
2026-05-29T04:24:36.415484Z 01O     libs    2.2Mb
2026-05-29T04:24:36.415484Z 01O     po      1.7Mb
2026-05-29T04:24:36.415484Z 01O     tests   2.2Mb
2026-05-29T04:24:36.426450Z 01O * checking package directory ... OK
2026-05-29T04:24:36.426874Z 01O * checking for future file timestamps ... OK
2026-05-29T04:24:36.427560Z 01O * checking ‘build’ directory ... OK
2026-05-29T04:24:36.428607Z 01O * checking DESCRIPTION meta-information ... OK
2026-05-29T04:24:37.912863Z 01O * checking top-level files ... OK
2026-05-29T04:24:39.248695Z 01O * checking for left-over files ... OK
2026-05-29T04:24:39.251334Z 01O * checking index information ... OK
2026-05-29T04:24:39.445067Z 01O * checking package subdirectories ... OK
2026-05-29T04:24:39.923906Z 01O * checking code files for non-ASCII characters ... OK
2026-05-29T04:24:39.976903Z 01O * checking R files for syntax errors ... OK
2026-05-29T04:24:40.059798Z 01O * checking whether the package can be loaded ... OK
2026-05-29T04:24:40.360689Z 01O * checking whether the package can be loaded with stated dependencies ... OK
2026-05-29T04:24:40.563490Z 01O * checking whether the package can be unloaded cleanly ... OK
2026-05-29T04:24:40.764560Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK
2026-05-29T04:24:40.970753Z 01O * checking whether the namespace can be unloaded cleanly ... OK
2026-05-29T04:24:41.272897Z 01O * checking loading without being on the library search path ... OK
2026-05-29T04:24:41.874199Z 01O * checking whether startup messages can be suppressed ... OK
2026-05-29T04:24:42.206441Z 01O * checking use of S3 registration ... OK
2026-05-29T04:24:42.238819Z 01O * checking dependencies in R code ... OK
2026-05-29T04:24:44.038321Z 01O * checking S3 generic/method consistency ... OK
2026-05-29T04:24:44.579623Z 01O * checking replacement functions ... OK
2026-05-29T04:24:44.813421Z 01O * checking foreign function calls ... OK
2026-05-29T04:24:46.964084Z 01O * checking R code for possible problems ... [44s/44s] OK
2026-05-29T04:25:30.684626Z 01O * checking Rd files ... OK
2026-05-29T04:25:32.173821Z 01O * checking Rd metadata ... OK
2026-05-29T04:25:32.221290Z 01O * checking Rd line widths ... OK
2026-05-29T04:25:32.768803Z 01O * checking Rd cross-references ... OK
2026-05-29T04:25:33.989381Z 01O * checking for missing documentation entries ... OK
2026-05-29T04:25:34.364105Z 01O * checking for code/documentation mismatches ... OK
2026-05-29T04:25:35.845421Z 01O * checking Rd \usage sections ... OK
2026-05-29T04:25:37.181762Z 01O * checking Rd contents ... OK
2026-05-29T04:25:38.287488Z 01O * checking for unstated dependencies in examples ... OK
2026-05-29T04:25:39.170514Z 01O * checking line endings in shell scripts ... OK
2026-05-29T04:25:39.171065Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK
2026-05-29T04:25:39.187483Z 01O * checking line endings in Makefiles ... OK
2026-05-29T04:25:39.188007Z 01O * checking compilation flags in Makevars ... OK
2026-05-29T04:25:39.243591Z 01O * checking for GNU extensions in Makefiles ... OK
2026-05-29T04:25:39.244380Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
2026-05-29T04:25:39.245655Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK
2026-05-29T04:25:39.248464Z 01O * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
2026-05-29T04:25:39.253219Z 01O * checking pragmas in C/C++ headers and code ... OK
2026-05-29T04:25:39.271039Z 01O * checking compilation flags used ... OK
2026-05-29T04:25:39.272729Z 01O * checking compiled code ... OK
2026-05-29T04:25:39.352711Z 01O * checking installed files from ‘inst/doc’ ... OK
2026-05-29T04:25:39.598451Z 01O * checking files in ‘vignettes’ ... OK
2026-05-29T04:25:40.844800Z 01O * checking examples ... OK
2026-05-29T04:25:49.984642Z 01O * checking examples with --run-donttest ... [11s/12s] OK
2026-05-29T04:26:02.413392Z 01O * checking for unstated dependencies in ‘tests’ ... OK
2026-05-29T04:26:02.491340Z 01O * checking tests ...
2026-05-29T04:26:02.679103Z 01O   Running ‘autoprint.R’
2026-05-29T04:26:03.067225Z 01O   Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
2026-05-29T04:26:03.073400Z 01O   Running ‘froll.R’ [22m/22m]
2026-05-29T04:47:58.485819Z 01O   Running ‘litedown.R’
2026-05-29T04:47:58.948542Z 01O   Running ‘main.R’ [209s/205s]
2026-05-29T04:51:23.756002Z 01O   Running ‘mergelist.R’
2026-05-29T04:51:27.096779Z 01O   Running ‘nafill.R’
2026-05-29T04:51:28.041586Z 01O   Running ‘optimize.R’
2026-05-29T04:51:30.888826Z 01O   Running ‘other.R’
2026-05-29T04:51:31.194182Z 01O   Running ‘programming.R’
2026-05-29T04:51:32.266555Z 01O   Running ‘S4.R’
2026-05-29T04:51:32.788449Z 01O   Running ‘types.R’
2026-05-29T04:51:33.162926Z 01O  [26m/26m] OK
2026-05-29T04:51:33.269979Z 01O * checking for unstated dependencies in vignettes ... OK
2026-05-29T04:51:33.654452Z 01O * checking package vignettes ... OK
2026-05-29T04:51:34.310839Z 01O * checking re-building of vignette outputs ... [35s/35s] OK
2026-05-29T04:52:09.640797Z 01O * checking PDF version of manual ... OK
2026-05-29T04:52:17.242001Z 01O * checking HTML version of manual ... [15s/15s] NOTE
2026-05-29T04:52:32.424591Z 01O Skipping checking math rendering: package 'V8' unavailable
2026-05-29T04:52:32.424983Z 01O * checking for non-standard things in the check directory ... OK
2026-05-29T04:52:32.425548Z 01O * checking for detritus in the temp directory ... OK
2026-05-29T04:52:32.426162Z 01O * DONE
2026-05-29T04:52:32.426593Z 01E 
2026-05-29T04:52:32.426721Z 01O Status: 1 NOTE
2026-05-29T04:52:32.426941Z 01E See
2026-05-29T04:52:32.426942Z 01E   ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’
2026-05-29T04:52:32.426943Z 01E for details.
2026-05-29T04:52:32.427050Z 01E 
2026-05-29T04:52:32.440322Z 01O $ (! grep "warning:" data.table.Rcheck/00install.out)
2026-05-29T04:52:32.441870Z 01O $ Rscript -e 'l=tail(readLines("data.table.Rcheck/00check.log"), 1L); notes<-"Status: 1 NOTE"; if (!identical(l, notes)) stop("Last line of ", shQuote("00check.log"), " is not ", shQuote(notes), " (V8 package) but ", shQuote(l)) else q("no")'
2026-05-29T04:52:32.768427Z 00O section_end:1780030352:step_script
2026-05-29T04:52:32.768434Z 00O+section_start:1780030352:after_script
2026-05-29T04:52:32.768943Z 00O+Running after_script
2026-05-29T04:52:33.061076Z 01O Running after script...
2026-05-29T04:52:33.061102Z 01O $ mkdir -p bus/$CI_JOB_NAME
2026-05-29T04:52:33.061896Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id
2026-05-29T04:52:33.061939Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status
2026-05-29T04:52:33.061984Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image
2026-05-29T04:52:33.062009Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/
2026-05-29T04:52:33.201724Z 00O section_end:1780030353:after_script
2026-05-29T04:52:33.201728Z 00O+section_start:1780030353:upload_artifacts_on_success
2026-05-29T04:52:33.202421Z 00O+Uploading artifacts for successful job
2026-05-29T04:52:33.538175Z 01O Uploading artifacts...
2026-05-29T04:52:33.586774Z 01E bus/test-lin-dev-gcc-strict-cran: found 714 matching artifact files and directories 
2026-05-29T04:52:35.877281Z 01E Uploading artifacts as "archive" to coordinator... 201 Created  correlation_id=063e52c4654d4eaba9d44f61186b8868 id=14595616717 status=201 token=6f_Mz4Ry3
2026-05-29T04:52:36.021894Z 00O section_end:1780030356:upload_artifacts_on_success
2026-05-29T04:52:36.021899Z 00O+section_start:1780030356:cleanup_file_variables
2026-05-29T04:52:36.022004Z 00O+Cleaning up project directory and file based variables
2026-05-29T04:52:36.456074Z 00O section_end:1780030356:cleanup_file_variables
2026-05-29T04:52:36.456078Z 00O+
2026-05-29T04:52:36.481381Z 00O Job succeeded