2026-08-28T04:21:51.989320Z 00O Running with gitlab-runner 19.3.0 (9cbf0074)
2026-08-28T04:21:51.989341Z 00O   on k8s.saas-linux-medium-amd64.runners-manager.gitlab.com/default j8vTLRhES, system ID: r_wckOhinHkcR5
2026-08-28T04:21:51.989348Z 00O   feature flags: FF_USE_FASTZIP:true, FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true
2026-08-28T04:21:51.989375Z 00O Resolving secrets
2026-08-28T04:21:51.989570Z 00O section_start:1787890911:prepare_executor

2026-08-28T04:21:51.989575Z 00O+Preparing the "docker+machine" executor
2026-08-28T04:21:52.168929Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-data.table ...
2026-08-28T04:21:52.170010Z 00O Using helper image:  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.3.0
2026-08-28T04:21:52.170030Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.3.0
2026-08-28T04:21:52.170843Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-08-28T04:21:52.170854Z 00O Pulling docker image registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.3.0 ...
2026-08-28T04:21:53.672783Z 00O Using docker image sha256:c346e671eac589538f0d90fe3835e994540bf7d2bb7e8d857e616c1f4b0e1620 for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.3.0 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:47b7976ad6aa1cf103ead2b453fdc67c13d16a2e3345d79f17f76b53bde50632 ...
2026-08-28T04:21:55.345257Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-data.table
2026-08-28T04:21:55.345986Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-08-28T04:21:55.345996Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-data.table ...
2026-08-28T04:22:07.324295Z 00O Using docker image sha256:e8c9342a86b9b495336ad2119f715a2055e8157dc4712be2cef8647d2aeea81e for registry.gitlab.com/rdatatable/dockerfiles/r-data.table with digest registry.gitlab.com/rdatatable/dockerfiles/r-data.table@sha256:52e97c94b43c2a027999ce7f1dcba88da56d3daf4283cbdc6a56408d74ce227b ...
2026-08-28T04:22:07.324385Z 00O section_end:1787890927:prepare_executor

2026-08-28T04:22:07.324529Z 00O+section_start:1787890927:prepare_script

2026-08-28T04:22:07.324537Z 00O+Preparing environment
2026-08-28T04:22:07.325619Z 00O Using effective pull policy of [always] for container sha256:c346e671eac589538f0d90fe3835e994540bf7d2bb7e8d857e616c1f4b0e1620
2026-08-28T04:22:15.786535Z 01O Running on runner-j8vtlrhes-project-3622566-concurrent-0 via runner-j8vtlrhes-s-l-m-amd64-1787890643-e88984fb...
2026-08-28T04:22:15.950131Z 00O section_end:1787890935:prepare_script

2026-08-28T04:22:15.950757Z 00O+section_start:1787890935:get_sources

2026-08-28T04:22:15.950765Z 00O+Getting source from Git repository
2026-08-28T04:22:16.321286Z 01O Gitaly correlation ID: 9f524057b9514ff9a7e4c1dbbe638ea7
2026-08-28T04:22:16.327719Z 01O Fetching changes...
2026-08-28T04:22:16.331467Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/
2026-08-28T04:22:16.334039Z 01O Created fresh repository.
2026-08-28T04:22:22.303601Z 01O Checking out e26cf1b6 as detached HEAD (ref is master)...
2026-08-28T04:22:22.497145Z 01O 
2026-08-28T04:22:22.497152Z 01O Skipping Git submodules setup
2026-08-28T04:22:22.497160Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping'
2026-08-28T04:22:22.705485Z 00O section_end:1787890942:get_sources

2026-08-28T04:22:22.706275Z 00O+section_start:1787890942:download_artifacts

2026-08-28T04:22:22.706282Z 00O+Downloading artifacts
2026-08-28T04:22:23.113062Z 01O Downloading artifacts for build (16161768334)...
2026-08-28T04:22:23.364033Z 01E Direct download from storage.googleapis.com         correlation_id=529c221d0b894a3284a9c04cee060ad9 id=16161768334 status=302 token=72_4wscLe
2026-08-28T04:22:23.558042Z 01E Downloading artifacts from coordinator... ok        correlation_id=529c221d0b894a3284a9c04cee060ad9 id=16161768334 status=302 token=72_4wscLe
2026-08-28T04:22:23.570562Z 01O Downloading artifacts for mirror-packages (16161768333)...
2026-08-28T04:22:23.796789Z 01E Direct download from storage.googleapis.com         correlation_id=8e446a29660f42178e5332b178f783ed id=16161768333 status=302 token=72_4wscLe
2026-08-28T04:22:24.328981Z 01E Downloading artifacts from coordinator... ok        correlation_id=8e446a29660f42178e5332b178f783ed id=16161768333 status=302 token=72_4wscLe
2026-08-28T04:22:25.393034Z 00O section_end:1787890945:download_artifacts

2026-08-28T04:22:25.393501Z 00O+section_start:1787890945:step_script

2026-08-28T04:22:25.393511Z 00O+Executing "step_script" stage of the job script
2026-08-28T04:22:25.393524Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-data.table
2026-08-28T04:22:25.394877Z 00O Using docker image sha256:e8c9342a86b9b495336ad2119f715a2055e8157dc4712be2cef8647d2aeea81e for registry.gitlab.com/rdatatable/dockerfiles/r-data.table with digest registry.gitlab.com/rdatatable/dockerfiles/r-data.table@sha256:52e97c94b43c2a027999ce7f1dcba88da56d3daf4283cbdc6a56408d74ce227b ...
2026-08-28T04:22:25.767028Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) .
2026-08-28T04:22:25.777227Z 01O $ mkdir -p ~/.R
2026-08-28T04:22:25.779152Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)'
2026-08-28T04:22:26.001911Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘commonmark’, ‘evaluate’, ‘highr’
2026-08-28T04:22:26.001923Z 01E 
2026-08-28T04:23:36.035980Z 01O $ echo 'CFLAGS=-g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' > ~/.R/Makevars
2026-08-28T04:23:36.035994Z 01O $ echo 'CXXFLAGS=-g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' >> ~/.R/Makevars
2026-08-28T04:23:36.035997Z 01O $ echo '_R_CHECK_COMPILATION_FLAGS_KNOWN_=-Wvla' >> ~/.Renviron
2026-08-28T04:23:36.036001Z 01O $ res1=0; R CMD check --as-cran $(ls -1t data.table_*.tar.gz | head -n 1) || res1=$? # collapsed multi-line command
2026-08-28T04:23:36.233755Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’
2026-08-28T04:23:36.233773Z 01O * using R version 4.5.0 (2025-04-11)
2026-08-28T04:23:36.234036Z 01O * using platform: x86_64-pc-linux-gnu
2026-08-28T04:23:36.234331Z 01O * R was compiled by
2026-08-28T04:23:36.234408Z 01O     gcc (Debian 14.2.0-19) 14.2.0
2026-08-28T04:23:36.234410Z 01O     GNU Fortran (Debian 14.2.0-19) 14.2.0
2026-08-28T04:23:36.234642Z 01O * running under: Debian GNU/Linux 13 (trixie)
2026-08-28T04:23:36.234878Z 01O * using session charset: UTF-8
2026-08-28T04:23:37.037351Z 01O * using option ‘--as-cran’
2026-08-28T04:23:37.037787Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK
2026-08-28T04:23:37.040417Z 01O * this is package ‘data.table’ version ‘1.18.99’
2026-08-28T04:23:37.040771Z 01O * package encoding: UTF-8
2026-08-28T04:23:37.040921Z 01O * checking CRAN incoming feasibility ... [15s/517s] NOTE
2026-08-28T04:32:14.110612Z 01O Maintainer: ‘Tyson Barrett <t.barrett88@gmail.com>’
2026-08-28T04:32:14.110616Z 01O 
2026-08-28T04:32:14.110617Z 01O Days since last update: 4
2026-08-28T04:32:14.110618Z 01O 
2026-08-28T04:32:14.110618Z 01O Authors@R field should be a call to person(), or combine such calls.
2026-08-28T04:32:14.110619Z 01O 
2026-08-28T04:32:14.110619Z 01O Found the following (possibly) invalid URLs:
2026-08-28T04:32:14.110620Z 01O   URL: https://bugs.r-project.org/show_bug.cgi?id=17909
2026-08-28T04:32:14.110621Z 01O     From: NEWS.md
2026-08-28T04:32:14.110621Z 01O     Status: 418
2026-08-28T04:32:14.110622Z 01O     Message: (Unused)
2026-08-28T04:32:14.110622Z 01O   URL: https://mac.r-project.org/openmp (moved to https://mac.r-project.org/openmp/)
2026-08-28T04:32:14.110623Z 01O     From: NEWS.md
2026-08-28T04:32:14.110623Z 01O     Status: 200
2026-08-28T04:32:14.110623Z 01O     Message: OK
2026-08-28T04:32:14.110624Z 01O   URL: https://medium.com/basecs/getting-to-the-root-of-sorting-with-radix-sort-f8e9240d4224
2026-08-28T04:32:14.110625Z 01O     From: man/setorder.Rd
2026-08-28T04:32:14.110625Z 01O     Status: 403
2026-08-28T04:32:14.110625Z 01O     Message: Forbidden
2026-08-28T04:32:14.110626Z 01O   URL: https://medium.datadriveninvestor.com/most-starred-and-forked-github-repos-for-r-in-data-science-fb87a54d2a6a
2026-08-28T04:32:14.110627Z 01O     From: README.md
2026-08-28T04:32:14.110627Z 01O     Status: 403
2026-08-28T04:32:14.110627Z 01O     Message: Forbidden
2026-08-28T04:32:14.110628Z 01O   URL: https://stackoverflow.com/a/10529888/403310
2026-08-28T04:32:14.110628Z 01O     From: inst/doc/datatable-faq.html
2026-08-28T04:32:14.110629Z 01O     Status: 403
2026-08-28T04:32:14.110629Z 01O     Message: Forbidden
2026-08-28T04:32:14.110630Z 01O   URL: https://stackoverflow.com/a/10913296/403310
2026-08-28T04:32:14.110630Z 01O     From: man/address.Rd
2026-08-28T04:32:14.110631Z 01O     Status: 403
2026-08-28T04:32:14.110631Z 01O     Message: Forbidden
2026-08-28T04:32:14.110631Z 01O   URL: https://stackoverflow.com/a/27004566/559784
2026-08-28T04:32:14.110632Z 01O     From: man/data.table.Rd
2026-08-28T04:32:14.110632Z 01O     Status: 403
2026-08-28T04:32:14.110633Z 01O     Message: Forbidden
2026-08-28T04:32:14.110633Z 01O   URL: https://stackoverflow.com/a/40164111/2490497
2026-08-28T04:32:14.110634Z 01O     From: inst/doc/datatable-programming.html
2026-08-28T04:32:14.110634Z 01O     Status: 403
2026-08-28T04:32:14.110635Z 01O     Message: Forbidden
2026-08-28T04:32:14.110635Z 01O   URL: https://stackoverflow.com/a/47406952/3576984
2026-08-28T04:32:14.110636Z 01O     From: inst/doc/datatable-sd-usage.html
2026-08-28T04:32:14.110636Z 01O     Status: 403
2026-08-28T04:32:14.110636Z 01O     Message: Forbidden
2026-08-28T04:32:14.110637Z 01O   URL: https://stackoverflow.com/a/73408459/2490497
2026-08-28T04:32:14.110637Z 01O     From: NEWS.md
2026-08-28T04:32:14.110638Z 01O     Status: 403
2026-08-28T04:32:14.110638Z 01O     Message: Forbidden
2026-08-28T04:32:14.110639Z 01O   URL: https://stackoverflow.com/a/9818473/403310
2026-08-28T04:32:14.110639Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110639Z 01O     Status: 403
2026-08-28T04:32:14.110640Z 01O     Message: Forbidden
2026-08-28T04:32:14.110640Z 01O   URL: https://stackoverflow.com/q/21421047/559784
2026-08-28T04:32:14.110641Z 01O     From: man/rleid.Rd
2026-08-28T04:32:14.110641Z 01O     Status: 403
2026-08-28T04:32:14.110642Z 01O     Message: Forbidden
2026-08-28T04:32:14.110642Z 01O   URL: https://stackoverflow.com/q/23898969/559784
2026-08-28T04:32:14.110643Z 01O     From: inst/doc/datatable-reference-semantics.html
2026-08-28T04:32:14.110643Z 01O     Status: 403
2026-08-28T04:32:14.110643Z 01O     Message: Forbidden
2026-08-28T04:32:14.110644Z 01O   URL: https://stackoverflow.com/q/7033106/559784
2026-08-28T04:32:14.110644Z 01O     From: inst/doc/datatable-reference-semantics.html
2026-08-28T04:32:14.110645Z 01O     Status: 403
2026-08-28T04:32:14.110645Z 01O     Message: Forbidden
2026-08-28T04:32:14.110800Z 01O   URL: https://stackoverflow.com/questions/10600060/how-to-do-cross-join-in-r
2026-08-28T04:32:14.110801Z 01O     From: inst/doc/datatable-joins.html
2026-08-28T04:32:14.110802Z 01O     Status: 403
2026-08-28T04:32:14.110803Z 01O     Message: Forbidden
2026-08-28T04:32:14.110804Z 01O   URL: https://stackoverflow.com/questions/11782084/reading-in-large-text-files-in-r
2026-08-28T04:32:14.110804Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110805Z 01O     Status: 403
2026-08-28T04:32:14.110806Z 01O     Message: Forbidden
2026-08-28T04:32:14.110806Z 01O   URL: https://stackoverflow.com/questions/15170741/how-does-one-do-a-full-join-using-data-table
2026-08-28T04:32:14.110807Z 01O     From: inst/doc/datatable-joins.html
2026-08-28T04:32:14.110808Z 01O     Status: 403
2026-08-28T04:32:14.110809Z 01O     Message: Forbidden
2026-08-28T04:32:14.110809Z 01O   URL: https://stackoverflow.com/questions/1727772/quickly-reading-very-large-tables-as-dataframes-in-r
2026-08-28T04:32:14.110811Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110811Z 01O     Status: 403
2026-08-28T04:32:14.110811Z 01O     Message: Forbidden
2026-08-28T04:32:14.110812Z 01O   URL: https://stackoverflow.com/questions/18969420/perform-a-semi-join-with-data-table
2026-08-28T04:32:14.110813Z 01O     From: inst/doc/datatable-joins.html
2026-08-28T04:32:14.110813Z 01O     Status: 403
2026-08-28T04:32:14.110813Z 01O     Message: Forbidden
2026-08-28T04:32:14.110814Z 01O   URL: https://stackoverflow.com/questions/20039335/what-is-the-purpose-of-setting-a-key-in-data-table/20057411#20057411
2026-08-28T04:32:14.110815Z 01O     From: inst/doc/datatable-faq.html
2026-08-28T04:32:14.110815Z 01O     Status: 403
2026-08-28T04:32:14.110815Z 01O     Message: Forbidden
2026-08-28T04:32:14.110816Z 01O   URL: https://stackoverflow.com/questions/20345022/convert-a-data-frame-to-a-data-table-without-copy
2026-08-28T04:32:14.110816Z 01O     From: man/setDT.Rd
2026-08-28T04:32:14.110817Z 01O     Status: 403
2026-08-28T04:32:14.110817Z 01O     Message: Forbidden
2026-08-28T04:32:14.110818Z 01O   URL: https://stackoverflow.com/questions/22137591/about-gforce-in-data-table-1-9-2
2026-08-28T04:32:14.110818Z 01O     From: inst/doc/datatable-sd-usage.html
2026-08-28T04:32:14.110819Z 01O     Status: 403
2026-08-28T04:32:14.110819Z 01O     Message: Forbidden
2026-08-28T04:32:14.110820Z 01O   URL: https://stackoverflow.com/questions/258091/when-should-i-use-mmap-for-file-access
2026-08-28T04:32:14.110820Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110821Z 01O     Status: 403
2026-08-28T04:32:14.110821Z 01O     Message: Forbidden
2026-08-28T04:32:14.110821Z 01O   URL: https://stackoverflow.com/questions/29658627/conditional-binary-join-and-update-by-reference-using-the-data-table-package
2026-08-28T04:32:14.110822Z 01O     From: inst/doc/datatable-sd-usage.html
2026-08-28T04:32:14.110823Z 01O     Status: 403
2026-08-28T04:32:14.110823Z 01O     Message: Forbidden
2026-08-28T04:32:14.110823Z 01O   URL: https://stackoverflow.com/questions/31329939/conditional-keyed-join-update-and-update-a-flag-column-for-matches
2026-08-28T04:32:14.110824Z 01O     From: inst/doc/datatable-sd-usage.html
2026-08-28T04:32:14.110825Z 01O     Status: 403
2026-08-28T04:32:14.110825Z 01O     Message: Forbidden
2026-08-28T04:32:14.110825Z 01O   URL: https://stackoverflow.com/questions/35179911/shift-in-data-table-v1-9-6-is-slow-for-many-groups
2026-08-28T04:32:14.110826Z 01O     From: NEWS.md
2026-08-28T04:32:14.110826Z 01O     Status: 403
2026-08-28T04:32:14.110827Z 01O     Message: Forbidden
2026-08-28T04:32:14.110827Z 01O   URL: https://stackoverflow.com/questions/36256706/fread-together-with-grepl/36270543#36270543
2026-08-28T04:32:14.110828Z 01O     From: inst/doc/datatable-fread-and-fwrite.html
2026-08-28T04:32:14.110828Z 01O     Status: 403
2026-08-28T04:32:14.110829Z 01O     Message: Forbidden
2026-08-28T04:32:14.110829Z 01O   URL: https://stackoverflow.com/questions/415515/how-can-i-read-and-manipulate-csv-file-data-in-c
2026-08-28T04:32:14.110830Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110841Z 01O     Status: 403
2026-08-28T04:32:14.110842Z 01O     Message: Forbidden
2026-08-28T04:32:14.110842Z 01O   URL: https://stackoverflow.com/questions/45972/mmap-vs-reading-blocks
2026-08-28T04:32:14.110843Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110843Z 01O     Status: 403
2026-08-28T04:32:14.110843Z 01O     Message: Forbidden
2026-08-28T04:32:14.110844Z 01O   URL: https://stackoverflow.com/questions/9061736/faster-than-scan-with-rcpp
2026-08-28T04:32:14.110844Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110845Z 01O     Status: 403
2026-08-28T04:32:14.110845Z 01O     Message: Forbidden
2026-08-28T04:32:14.110846Z 01O   URL: https://stackoverflow.com/questions/9352887/strategies-for-reading-in-csv-files-in-pieces
2026-08-28T04:32:14.110846Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110847Z 01O     Status: 403
2026-08-28T04:32:14.110847Z 01O     Message: Forbidden
2026-08-28T04:32:14.110848Z 01O   URL: https://stackoverflow.com/questions/9608950/reading-huge-files-using-memory-mapped-files
2026-08-28T04:32:14.110848Z 01O     From: man/fread.Rd
2026-08-28T04:32:14.110849Z 01O     Status: 403
2026-08-28T04:32:14.110849Z 01O     Message: Forbidden
2026-08-28T04:32:14.110849Z 01O   URL: https://stackoverflow.com/questions/tagged/data.table
2026-08-28T04:32:14.110850Z 01O     From: README.md
2026-08-28T04:32:14.110850Z 01O     Status: 403
2026-08-28T04:32:14.110851Z 01O     Message: Forbidden
2026-08-28T04:32:14.110851Z 01O   URL: https://stackoverflow.com/questions/tagged/data.table/
2026-08-28T04:32:14.110852Z 01O     From: man/assign.Rd
2026-08-28T04:32:14.110852Z 01O     Status: 403
2026-08-28T04:32:14.110853Z 01O     Message: Forbidden
2026-08-28T04:32:14.110853Z 01O   URL: https://web.archive.org/web/20250623031725/https://h2o.ai/blog/2016/fast-csv-writing-for-r/
2026-08-28T04:32:14.110854Z 01O     From: man/fwrite.Rd
2026-08-28T04:32:14.110854Z 01O     Status: Error
2026-08-28T04:32:14.110855Z 01O     Message: libcurl error code 28:
2026-08-28T04:32:14.110855Z 01O       	Connection timed out after 60002 milliseconds
2026-08-28T04:32:14.110856Z 01O 
2026-08-28T04:32:14.110856Z 01O Size of tarball: 6033286 bytes
2026-08-28T04:32:14.110867Z 01O * checking package namespace information ... OK
2026-08-28T04:32:14.119066Z 01O * checking package dependencies ... OK
2026-08-28T04:32:15.324047Z 01O * checking if this is a source package ... OK
2026-08-28T04:32:15.327028Z 01O * checking if there is a namespace ... OK
2026-08-28T04:32:15.331938Z 01O * checking for .dll and .exe files ... OK
2026-08-28T04:32:15.332608Z 01O * checking for hidden files and directories ... OK
2026-08-28T04:32:15.336072Z 01O * checking for portable file names ... OK
2026-08-28T04:32:15.340942Z 01O * checking for sufficient/correct file permissions ... OK
2026-08-28T04:32:15.345760Z 01O * checking whether package ‘data.table’ can be installed ... [43s/22s] OK
2026-08-28T04:32:37.612428Z 01O * used C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’
2026-08-28T04:32:37.612843Z 01O * checking installed package size ... INFO
2026-08-28T04:32:37.617411Z 01O   installed size is  9.1Mb
2026-08-28T04:32:37.618083Z 01O   sub-directories of 1Mb or more:
2026-08-28T04:32:37.618727Z 01O     doc     1.1Mb
2026-08-28T04:32:37.618729Z 01O     libs    2.7Mb
2026-08-28T04:32:37.618730Z 01O     po      1.7Mb
2026-08-28T04:32:37.618731Z 01O     tests   2.2Mb
2026-08-28T04:32:37.631831Z 01O * checking package directory ... OK
2026-08-28T04:32:37.632533Z 01O * checking for future file timestamps ... OK
2026-08-28T04:32:37.632998Z 01O * checking ‘build’ directory ... OK
2026-08-28T04:32:37.633888Z 01O * checking DESCRIPTION meta-information ... OK
2026-08-28T04:32:38.398442Z 01O * checking top-level files ... OK
2026-08-28T04:32:39.994871Z 01O * checking for left-over files ... OK
2026-08-28T04:32:39.997897Z 01O * checking index information ... OK
2026-08-28T04:32:40.172582Z 01O * checking package subdirectories ... OK
2026-08-28T04:32:40.675416Z 01O * checking code files for non-ASCII characters ... OK
2026-08-28T04:32:40.729843Z 01O * checking R files for syntax errors ... OK
2026-08-28T04:32:40.814529Z 01O * checking whether the package can be loaded ... OK
2026-08-28T04:32:41.015194Z 01O * checking whether the package can be loaded with stated dependencies ... OK
2026-08-28T04:32:41.176904Z 01O * checking whether the package can be unloaded cleanly ... OK
2026-08-28T04:32:41.339960Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK
2026-08-28T04:32:41.506737Z 01O * checking whether the namespace can be unloaded cleanly ... OK
2026-08-28T04:32:41.725225Z 01O * checking loading without being on the library search path ... OK
2026-08-28T04:32:42.141110Z 01O * checking whether startup messages can be suppressed ... OK
2026-08-28T04:32:42.348606Z 01O * checking use of S3 registration ... OK
2026-08-28T04:32:43.380280Z 01O * checking dependencies in R code ... OK
2026-08-28T04:32:44.302620Z 01O * checking S3 generic/method consistency ... OK
2026-08-28T04:32:44.661757Z 01O * checking replacement functions ... OK
2026-08-28T04:32:44.885870Z 01O * checking foreign function calls ... OK
2026-08-28T04:32:45.696005Z 01O * checking R code for possible problems ... [17s/17s] OK
2026-08-28T04:33:03.174271Z 01O * checking Rd files ... OK
2026-08-28T04:33:03.775387Z 01O * checking Rd metadata ... OK
2026-08-28T04:33:03.820760Z 01O * checking Rd line widths ... NOTE
2026-08-28T04:33:04.144797Z 01O Rd file 'nafill.Rd':
2026-08-28T04:33:04.144799Z 01O   \usage lines wider than 90 characters:
2026-08-28T04:33:04.144800Z 01O      setnafill(x, type=c("const", "locf", "nocb"), fill=NA, nan=NA, cols=seq_along(x), limit=Inf)
2026-08-28T04:33:04.144802Z 01O 
2026-08-28T04:33:04.145116Z 01O These lines will be truncated in the PDF manual.
2026-08-28T04:33:04.145231Z 01O * checking Rd cross-references ... OK
2026-08-28T04:33:04.675460Z 01O * checking for missing documentation entries ... OK
2026-08-28T04:33:04.907569Z 01O * checking for code/documentation mismatches ... OK
2026-08-28T04:33:05.936742Z 01O * checking Rd \usage sections ... OK
2026-08-28T04:33:06.900122Z 01O * checking Rd contents ... OK
2026-08-28T04:33:07.381154Z 01O * checking for unstated dependencies in examples ... OK
2026-08-28T04:33:07.866723Z 01O * checking line endings in shell scripts ... OK
2026-08-28T04:33:07.867240Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK
2026-08-28T04:33:07.886066Z 01O * checking line endings in Makefiles ... OK
2026-08-28T04:33:07.886688Z 01O * checking compilation flags in Makevars ... OK
2026-08-28T04:33:07.943592Z 01O * checking for GNU extensions in Makefiles ... OK
2026-08-28T04:33:07.944430Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
2026-08-28T04:33:07.945782Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK
2026-08-28T04:33:07.950045Z 01O * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
2026-08-28T04:33:07.956802Z 01O * checking pragmas in C/C++ headers and code ... OK
2026-08-28T04:33:07.980494Z 01O * checking compilation flags used ... OK
2026-08-28T04:33:07.982001Z 01O * checking compiled code ... NOTE
2026-08-28T04:33:08.064923Z 01O File ‘data.table/libs/data.table.so’:
2026-08-28T04:33:08.064927Z 01O   Found non-API calls to R: ‘IS_GROWABLE’, ‘LEVELS’, ‘R_GetConnection’,
2026-08-28T04:33:08.064929Z 01O     ‘R_ReadConnection’, ‘SETLENGTH’, ‘SET_GROWABLE_BIT’,
2026-08-28T04:33:08.064930Z 01O     ‘SET_TRUELENGTH’, ‘TRUELENGTH’, ‘XTRUELENGTH’
2026-08-28T04:33:08.065306Z 01O 
2026-08-28T04:33:08.065309Z 01O Compiled code should not call non-API entry points in R.
2026-08-28T04:33:08.065311Z 01O 
2026-08-28T04:33:08.065312Z 01O See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
2026-08-28T04:33:08.065313Z 01O and section ‘Moving into C API compliance’ for issues with the use of
2026-08-28T04:33:08.065314Z 01O non-API entry points.
2026-08-28T04:33:08.066456Z 01O * checking installed files from ‘inst/doc’ ... OK
2026-08-28T04:33:08.274475Z 01O * checking files in ‘vignettes’ ... OK
2026-08-28T04:33:08.491525Z 01O * checking examples ... OK
2026-08-28T04:33:16.063619Z 01O * checking examples with --run-donttest ... OK
2026-08-28T04:33:25.863052Z 01O * checking for unstated dependencies in ‘tests’ ... OK
2026-08-28T04:33:25.931257Z 01O * checking tests ...
2026-08-28T04:33:26.081519Z 01E   Running ‘autoprint.R’
2026-08-28T04:33:26.329055Z 01E   Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
2026-08-28T04:33:26.337243Z 01E   Running ‘froll.R’ [447s/428s]
2026-08-28T04:40:33.877027Z 01E   Running ‘litedown.R’
2026-08-28T04:40:34.201560Z 01E   Running ‘main.R’ [51s/47s]
2026-08-28T04:41:20.883461Z 01E   Running ‘mergelist.R’
2026-08-28T04:41:22.503138Z 01E   Running ‘nafill.R’
2026-08-28T04:41:23.021011Z 01E   Running ‘optimize.R’
2026-08-28T04:41:24.448764Z 01E   Running ‘other.R’
2026-08-28T04:41:24.669604Z 01E   Running ‘programming.R’
2026-08-28T04:41:25.301956Z 01E   Running ‘S4.R’
2026-08-28T04:41:25.639751Z 01E   Running ‘self.R’
2026-08-28T04:41:25.883588Z 01E   Running ‘types.R’
2026-08-28T04:41:26.143102Z 01O  [505s/480s] OK
2026-08-28T04:41:26.258161Z 01O * checking for unstated dependencies in vignettes ... OK
2026-08-28T04:41:26.548766Z 01O * checking package vignettes ... OK
2026-08-28T04:41:27.240937Z 01O * checking re-building of vignette outputs ... [29s/30s] OK
2026-08-28T04:41:56.979840Z 01O * checking PDF version of manual ... OK
2026-08-28T04:42:03.369960Z 01O * checking HTML version of manual ... OK
2026-08-28T04:42:06.934914Z 01O * checking for non-standard things in the check directory ... OK
2026-08-28T04:42:06.935478Z 01O * checking for detritus in the temp directory ... OK
2026-08-28T04:42:06.936344Z 01O * DONE
2026-08-28T04:42:06.936746Z 01E 
2026-08-28T04:42:06.936772Z 01O Status: 3 NOTEs
2026-08-28T04:42:06.937082Z 01E See
2026-08-28T04:42:06.937086Z 01E   ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’
2026-08-28T04:42:06.937089Z 01E for details.
2026-08-28T04:42:06.937227Z 01E 
2026-08-28T04:42:06.973525Z 01O * installing *source* package ‘data.table’ ...
2026-08-28T04:42:06.973532Z 01O ** this is package ‘data.table’ version ‘1.18.99’
2026-08-28T04:42:06.973534Z 01O ** using staged installation
2026-08-28T04:42:06.973535Z 01O gcc -std=gnu23 14.2.0
2026-08-28T04:42:06.973536Z 01O zlib 1.3.1 is available ok
2026-08-28T04:42:06.973536Z 01O * checking if OpenMP works with CFLAGS='' LIBS=''... yes
2026-08-28T04:42:06.973537Z 01O ** libs
2026-08-28T04:42:06.973537Z 01O using C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’
2026-08-28T04:42:06.973538Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c assign.c -o assign.o
2026-08-28T04:42:06.973539Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c between.c -o between.o
2026-08-28T04:42:06.973540Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c bmerge.c -o bmerge.o
2026-08-28T04:42:06.973542Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c chmatch.c -o chmatch.o
2026-08-28T04:42:06.973543Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c cj.c -o cj.o
2026-08-28T04:42:06.973544Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c coalesce.c -o coalesce.o
2026-08-28T04:42:06.973545Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c deleterows.c -o deleterows.o
2026-08-28T04:42:06.973546Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c dogroups.c -o dogroups.o
2026-08-28T04:42:06.973547Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fastmean.c -o fastmean.o
2026-08-28T04:42:06.973548Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fcast.c -o fcast.o
2026-08-28T04:42:06.973549Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fifelse.c -o fifelse.o
2026-08-28T04:42:06.973550Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fmelt.c -o fmelt.o
2026-08-28T04:42:06.973579Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c forder.c -o forder.o
2026-08-28T04:42:06.973581Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frank.c -o frank.o
2026-08-28T04:42:06.973582Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fread.c -o fread.o
2026-08-28T04:42:06.973583Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c freadR.c -o freadR.o
2026-08-28T04:42:06.973584Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c froll.c -o froll.o
2026-08-28T04:42:06.973585Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frollR.c -o frollR.o
2026-08-28T04:42:06.973586Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frolladaptive.c -o frolladaptive.o
2026-08-28T04:42:06.973587Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frollapply.c -o frollapply.o
2026-08-28T04:42:06.973588Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fsort.c -o fsort.o
2026-08-28T04:42:06.973589Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fwrite.c -o fwrite.o
2026-08-28T04:42:06.973590Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fwriteR.c -o fwriteR.o
2026-08-28T04:42:06.973591Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c gsumm.c -o gsumm.o
2026-08-28T04:42:06.973592Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c hash.c -o hash.o
2026-08-28T04:42:06.973594Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c idatetime.c -o idatetime.o
2026-08-28T04:42:06.973595Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c ijoin.c -o ijoin.o
2026-08-28T04:42:06.973596Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c init.c -o init.o
2026-08-28T04:42:06.973597Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c inrange.c -o inrange.o
2026-08-28T04:42:06.973604Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c mergelist.c -o mergelist.o
2026-08-28T04:42:06.973605Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c nafill.c -o nafill.o
2026-08-28T04:42:06.973606Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c negate.c -o negate.o
2026-08-28T04:42:06.973607Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c nqrecreateindices.c -o nqrecreateindices.o
2026-08-28T04:42:06.973608Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c openmp-utils.c -o openmp-utils.o
2026-08-28T04:42:06.973609Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c programming.c -o programming.o
2026-08-28T04:42:06.973611Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c quickselect.c -o quickselect.o
2026-08-28T04:42:06.973612Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c rbindlist.c -o rbindlist.o
2026-08-28T04:42:06.973613Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c reorder.c -o reorder.o
2026-08-28T04:42:06.973614Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c shellsort.c -o shellsort.o
2026-08-28T04:42:06.973615Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c shift.c -o shift.o
2026-08-28T04:42:06.973616Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c snprintf.c -o snprintf.o
2026-08-28T04:42:06.973617Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c subset.c -o subset.o
2026-08-28T04:42:06.973618Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c transpose.c -o transpose.o
2026-08-28T04:42:06.973619Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c types.c -o types.o
2026-08-28T04:42:06.973620Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c uniqlist.c -o uniqlist.o
2026-08-28T04:42:06.973632Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o
2026-08-28T04:42:06.973633Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c vecseq.c -o vecseq.o
2026-08-28T04:42:06.973634Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG      -fvisibility=hidden    -fpic  -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c wrappers.c -o wrappers.o
2026-08-28T04:42:06.973635Z 01O gcc -std=gnu23 -shared -L/usr/lib/R/lib -Wl,-z,relro -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o deleterows.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fvisibility=hidden -lz -L/usr/lib/R/lib -lR
2026-08-28T04:42:06.973638Z 01O PKG_CFLAGS = -fvisibility=hidden
2026-08-28T04:42:06.973638Z 01O PKG_LIBS = -fvisibility=hidden -lz
2026-08-28T04:42:06.973639Z 01O installing to /builds/Rdatatable/data.table/data.table.Rcheck/00LOCK-data.table/00new/data.table/libs
2026-08-28T04:42:06.973640Z 01O ** R
2026-08-28T04:42:06.973640Z 01O ** inst
2026-08-28T04:42:06.973640Z 01O ** byte-compile and prepare package for lazy loading
2026-08-28T04:42:06.973641Z 01O ** help
2026-08-28T04:42:06.973641Z 01O *** installing help indices
2026-08-28T04:42:06.973642Z 01O ** building package indices
2026-08-28T04:42:06.973642Z 01O ** installing vignettes
2026-08-28T04:42:06.973643Z 01O ** testing if installed package can be loaded from temporary location
2026-08-28T04:42:06.973643Z 01O ** checking absolute paths in shared objects and dynamic libraries
2026-08-28T04:42:06.973644Z 01O ** testing if installed package can be loaded from final location
2026-08-28T04:42:06.973644Z 01O ** testing if installed package keeps a record of temporary installation path
2026-08-28T04:42:06.973645Z 01O * DONE (data.table)
2026-08-28T04:42:07.119837Z 01E Error: Last line of '00check.log' is not 'Status: 2 NOTEs' (CRAN incoming feasibility, non-API) but 'Status: 3 NOTEs'
2026-08-28T04:42:07.119846Z 01E Execution halted
2026-08-28T04:42:07.304463Z 00O section_end:1787892127:step_script

2026-08-28T04:42:07.304960Z 00O+section_start:1787892127:after_script

2026-08-28T04:42:07.304968Z 00O+Running after_script
2026-08-28T04:42:07.642836Z 01O Running after script...
2026-08-28T04:42:07.642872Z 01O $ mkdir -p bus/$CI_JOB_NAME
2026-08-28T04:42:07.644137Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id
2026-08-28T04:42:07.644146Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status
2026-08-28T04:42:07.644233Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image
2026-08-28T04:42:07.644239Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/
2026-08-28T04:42:07.804999Z 00O section_end:1787892127:after_script

2026-08-28T04:42:07.805750Z 00O+section_start:1787892127:upload_artifacts_on_failure

2026-08-28T04:42:07.805758Z 00O+Uploading artifacts for failed job
2026-08-28T04:42:08.203640Z 01O Uploading artifacts...
2026-08-28T04:42:08.266286Z 01E bus/test-lin-rel: found 720 matching artifact files and directories 
2026-08-28T04:42:09.536715Z 01E Uploading artifacts as "archive" to coordinator... 201 Created  correlation_id=de72355a747d42ab815a267c2a630be1 id=16161768335 status=201 token=72_4wscLe
2026-08-28T04:42:09.714443Z 00O section_end:1787892129:upload_artifacts_on_failure

2026-08-28T04:42:09.714989Z 00O+section_start:1787892129:cleanup_file_variables

2026-08-28T04:42:09.714998Z 00O+Cleaning up project directory and file based variables
2026-08-28T04:42:10.237936Z 00O section_end:1787892130:cleanup_file_variables

2026-08-28T04:42:10.275188Z 00O ERROR: Job failed: exit code 1