2026-10-12T04:21:04.755378Z 00O Running with gitlab-runner 19.5.0~pre.2272.g28a18501 (28a18501) 2026-10-12T04:21:04.755394Z 00O  on k8s.saas-linux-medium-amd64.runners-manager.gitlab.com/default j8vTLRhES, system ID: r_CaoJYRMkUEh1 2026-10-12T04:21:04.755396Z 00O  UUID: 01a01aa6-2f91-7d2c-b24d-7e2d2752ac58 2026-10-12T04:21:04.755403Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true, FF_USE_JOB_ROUTER:true, FF_MACHINE_OPTIONS_EXPAND_ENV:true, FF_DOCKER_MACHINE_JSON_OUTPUT:true 2026-10-12T04:21:04.755427Z 00O Resolving secrets 2026-10-12T04:21:04.755550Z 00O section_start:1791778864:prepare_executor  2026-10-12T04:21:04.755552Z 00O+Preparing the "docker+machine" executor 2026-10-12T04:21:04.832830Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-data.table ... 2026-10-12T04:21:04.832871Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 ) 2026-10-12T04:21:04.832879Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 2026-10-12T04:21:04.834282Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-10-12T04:21:04.834288Z 00O Pulling docker image registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 ... 2026-10-12T04:21:06.218847Z 00O Using docker image sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837 for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:eea1152121f06d47f94871fef69559be0a87c75212f227e34e7617d1a3bbe6c3 ... 2026-10-12T04:21:07.813175Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 ) 2026-10-12T04:21:07.813188Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 2026-10-12T04:21:07.814700Z 00O Using docker image sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837 for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:eea1152121f06d47f94871fef69559be0a87c75212f227e34e7617d1a3bbe6c3 ... 2026-10-12T04:21:07.814709Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-data.table 2026-10-12T04:21:07.815864Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-10-12T04:21:07.815869Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-data.table ... 2026-10-12T04:21:17.014365Z 00O Using docker image sha256:e8c9342a86b9b495336ad2119f715a2055e8157dc4712be2cef8647d2aeea81e for registry.gitlab.com/rdatatable/dockerfiles/r-data.table with digest registry.gitlab.com/rdatatable/dockerfiles/r-data.table@sha256:52e97c94b43c2a027999ce7f1dcba88da56d3daf4283cbdc6a56408d74ce227b ... 2026-10-12T04:21:17.014442Z 00O section_end:1791778877:prepare_executor  2026-10-12T04:21:17.014556Z 00O+section_start:1791778877:prepare_script  2026-10-12T04:21:17.014560Z 00O+Preparing environment 2026-10-12T04:21:17.014588Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 ) 2026-10-12T04:21:17.014596Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 2026-10-12T04:21:17.015999Z 00O Using docker image sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837 for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-28a18501 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:eea1152121f06d47f94871fef69559be0a87c75212f227e34e7617d1a3bbe6c3 ... 2026-10-12T04:21:17.016009Z 00O Using effective pull policy of [always] for container sha256:08749606eabcea842cbd189a80b2f3d7670b949f70dfc654d45d8b81554bd837 2026-10-12T04:21:26.214219Z 01O Running on runner-j8vtlrhes-project-3622566-concurrent-0 via runner-j8vtlrhes-s-l-m-amd64-1791777029-2fc7590f... 2026-10-12T04:21:26.217106Z 01O Running on CPU: INTEL(R) XEON(R) PLATINUM 8581C CPU @ 2.10GHz (avx, avx2, avx512f) 2026-10-12T04:21:26.352803Z 00O section_end:1791778886:prepare_script  2026-10-12T04:21:26.353179Z 00O+section_start:1791778886:get_sources  2026-10-12T04:21:26.353184Z 00O+Getting source from Git repository 2026-10-12T04:21:26.646524Z 01O Gitaly correlation ID: ea854db71dd34e9b945f0d8eae89e7d8 2026-10-12T04:21:26.651976Z 01O Fetching changes... 2026-10-12T04:21:26.654725Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-10-12T04:21:26.656711Z 01O Created fresh repository. 2026-10-12T04:21:31.494332Z 01O Checking out df59dd63 as detached HEAD (ref is master)... 2026-10-12T04:21:31.633348Z 01O 2026-10-12T04:21:31.633353Z 01O Skipping Git submodules setup 2026-10-12T04:21:31.633411Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-10-12T04:21:31.812709Z 00O section_end:1791778891:get_sources  2026-10-12T04:21:31.813308Z 00O+section_start:1791778891:download_artifacts  2026-10-12T04:21:31.813314Z 00O+Downloading artifacts 2026-10-12T04:21:32.138968Z 01O Downloading artifacts for build (17100991411)... 2026-10-12T04:21:32.367136Z 01E Direct download from storage.googleapis.com  correlation_id=9bea17570a8e454d9d0f9b197923f05b id=17100991411 status=302 token=74_YD46ip 2026-10-12T04:21:32.606838Z 01E Downloading artifacts from coordinator... ok  correlation_id=9bea17570a8e454d9d0f9b197923f05b id=17100991411 status=302 token=74_YD46ip 2026-10-12T04:21:32.614822Z 01O Downloading artifacts for mirror-packages (17100991410)... 2026-10-12T04:21:32.843348Z 01E Direct download from storage.googleapis.com  correlation_id=651faed1440644beaa4d3cc49e94afcc id=17100991410 status=302 token=74_YD46ip 2026-10-12T04:21:33.253197Z 01E Downloading artifacts from coordinator... ok  correlation_id=651faed1440644beaa4d3cc49e94afcc id=17100991410 status=302 token=74_YD46ip 2026-10-12T04:21:34.334874Z 00O section_end:1791778894:download_artifacts  2026-10-12T04:21:34.335254Z 00O+section_start:1791778894:step_script  2026-10-12T04:21:34.335263Z 00O+Executing "step_script" stage of the job script 2026-10-12T04:21:34.335280Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-data.table 2026-10-12T04:21:34.337309Z 00O Using docker image sha256:e8c9342a86b9b495336ad2119f715a2055e8157dc4712be2cef8647d2aeea81e for registry.gitlab.com/rdatatable/dockerfiles/r-data.table with digest registry.gitlab.com/rdatatable/dockerfiles/r-data.table@sha256:52e97c94b43c2a027999ce7f1dcba88da56d3daf4283cbdc6a56408d74ce227b ... 2026-10-12T04:21:34.640188Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-10-12T04:21:34.646551Z 01O $ mkdir -p ~/.R 2026-10-12T04:21:34.647587Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-10-12T04:21:34.834616Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘commonmark’, ‘evaluate’, ‘highr’ 2026-10-12T04:21:34.834624Z 01E 2026-10-12T04:22:30.273358Z 01O $ echo 'CFLAGS=-g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' > ~/.R/Makevars 2026-10-12T04:22:30.273364Z 01O $ echo 'CXXFLAGS=-g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' >> ~/.R/Makevars 2026-10-12T04:22:30.273366Z 01O $ echo '_R_CHECK_COMPILATION_FLAGS_KNOWN_=-Wvla' >> ~/.Renviron 2026-10-12T04:22:30.273377Z 01O $ res1=0; R CMD check --as-cran $(ls -1t data.table_*.tar.gz | head -n 1) || res1=$? # collapsed multi-line command 2026-10-12T04:22:30.424281Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-10-12T04:22:30.424347Z 01O * using R version 4.5.0 (2025-04-11) 2026-10-12T04:22:30.424372Z 01O * using platform: x86_64-pc-linux-gnu 2026-10-12T04:22:30.424521Z 01O * R was compiled by 2026-10-12T04:22:30.424577Z 01O gcc (Debian 14.2.0-19) 14.2.0 2026-10-12T04:22:30.424579Z 01O GNU Fortran (Debian 14.2.0-19) 14.2.0 2026-10-12T04:22:30.424733Z 01O * running under: Debian GNU/Linux 13 (trixie) 2026-10-12T04:22:30.424833Z 01O * using session charset: UTF-8 2026-10-12T04:22:31.029101Z 01O * using option ‘--as-cran’ 2026-10-12T04:22:31.029283Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-10-12T04:22:31.031641Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-10-12T04:22:31.031764Z 01O * package encoding: UTF-8 2026-10-12T04:22:31.031915Z 01O * checking CRAN incoming feasibility ... [12s/429s] NOTE 2026-10-12T04:29:39.601369Z 01O Maintainer: ‘Tyson Barrett ’ 2026-10-12T04:29:39.601371Z 01O 2026-10-12T04:29:39.601372Z 01O Found the following (possibly) invalid URLs: 2026-10-12T04:29:39.601373Z 01O URL: https://bugs.r-project.org/show_bug.cgi?id=17909 2026-10-12T04:29:39.601373Z 01O From: NEWS.md 2026-10-12T04:29:39.601374Z 01O Status: 418 2026-10-12T04:29:39.601374Z 01O Message: (Unused) 2026-10-12T04:29:39.601374Z 01O URL: https://medium.com/basecs/getting-to-the-root-of-sorting-with-radix-sort-f8e9240d4224 2026-10-12T04:29:39.601375Z 01O From: man/setorder.Rd 2026-10-12T04:29:39.601375Z 01O Status: 403 2026-10-12T04:29:39.601375Z 01O Message: Forbidden 2026-10-12T04:29:39.601376Z 01O URL: https://medium.datadriveninvestor.com/most-starred-and-forked-github-repos-for-r-in-data-science-fb87a54d2a6a 2026-10-12T04:29:39.601376Z 01O From: README.md 2026-10-12T04:29:39.601377Z 01O Status: 403 2026-10-12T04:29:39.601377Z 01O Message: Forbidden 2026-10-12T04:29:39.601377Z 01O URL: https://stackoverflow.com/a/10529888/403310 2026-10-12T04:29:39.601378Z 01O From: inst/doc/datatable-faq.html 2026-10-12T04:29:39.601378Z 01O Status: 403 2026-10-12T04:29:39.601378Z 01O Message: Forbidden 2026-10-12T04:29:39.601378Z 01O URL: https://stackoverflow.com/a/10913296/403310 2026-10-12T04:29:39.601379Z 01O From: man/address.Rd 2026-10-12T04:29:39.601379Z 01O Status: 403 2026-10-12T04:29:39.601379Z 01O Message: Forbidden 2026-10-12T04:29:39.601380Z 01O URL: https://stackoverflow.com/a/27004566/559784 2026-10-12T04:29:39.601380Z 01O From: man/data.table.Rd 2026-10-12T04:29:39.601380Z 01O Status: 403 2026-10-12T04:29:39.601381Z 01O Message: Forbidden 2026-10-12T04:29:39.601381Z 01O URL: https://stackoverflow.com/a/40164111/2490497 2026-10-12T04:29:39.601381Z 01O From: inst/doc/datatable-programming.html 2026-10-12T04:29:39.601382Z 01O Status: 403 2026-10-12T04:29:39.601382Z 01O Message: Forbidden 2026-10-12T04:29:39.601382Z 01O URL: https://stackoverflow.com/a/47406952/3576984 2026-10-12T04:29:39.601383Z 01O From: inst/doc/datatable-sd-usage.html 2026-10-12T04:29:39.601383Z 01O Status: 403 2026-10-12T04:29:39.601383Z 01O Message: Forbidden 2026-10-12T04:29:39.601384Z 01O URL: https://stackoverflow.com/a/73408459/2490497 2026-10-12T04:29:39.601384Z 01O From: NEWS.md 2026-10-12T04:29:39.601384Z 01O Status: 403 2026-10-12T04:29:39.601385Z 01O Message: Forbidden 2026-10-12T04:29:39.601385Z 01O URL: https://stackoverflow.com/a/9818473/403310 2026-10-12T04:29:39.601385Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601385Z 01O Status: 403 2026-10-12T04:29:39.601386Z 01O Message: Forbidden 2026-10-12T04:29:39.601386Z 01O URL: https://stackoverflow.com/q/21421047/559784 2026-10-12T04:29:39.601386Z 01O From: man/rleid.Rd 2026-10-12T04:29:39.601387Z 01O Status: 403 2026-10-12T04:29:39.601387Z 01O Message: Forbidden 2026-10-12T04:29:39.601387Z 01O URL: https://stackoverflow.com/q/23898969/559784 2026-10-12T04:29:39.601388Z 01O From: inst/doc/datatable-reference-semantics.html 2026-10-12T04:29:39.601388Z 01O Status: 403 2026-10-12T04:29:39.601388Z 01O Message: Forbidden 2026-10-12T04:29:39.601389Z 01O URL: https://stackoverflow.com/q/7033106/559784 2026-10-12T04:29:39.601389Z 01O From: inst/doc/datatable-reference-semantics.html 2026-10-12T04:29:39.601389Z 01O Status: 403 2026-10-12T04:29:39.601390Z 01O Message: Forbidden 2026-10-12T04:29:39.601390Z 01O URL: https://stackoverflow.com/questions/10600060/how-to-do-cross-join-in-r 2026-10-12T04:29:39.601390Z 01O From: inst/doc/datatable-joins.html 2026-10-12T04:29:39.601391Z 01O Status: 403 2026-10-12T04:29:39.601391Z 01O Message: Forbidden 2026-10-12T04:29:39.601391Z 01O URL: https://stackoverflow.com/questions/11782084/reading-in-large-text-files-in-r 2026-10-12T04:29:39.601392Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601418Z 01O Status: 403 2026-10-12T04:29:39.601419Z 01O Message: Forbidden 2026-10-12T04:29:39.601419Z 01O URL: https://stackoverflow.com/questions/15170741/how-does-one-do-a-full-join-using-data-table 2026-10-12T04:29:39.601420Z 01O From: inst/doc/datatable-joins.html 2026-10-12T04:29:39.601420Z 01O Status: 403 2026-10-12T04:29:39.601420Z 01O Message: Forbidden 2026-10-12T04:29:39.601421Z 01O URL: https://stackoverflow.com/questions/1727772/quickly-reading-very-large-tables-as-dataframes-in-r 2026-10-12T04:29:39.601421Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601421Z 01O Status: 403 2026-10-12T04:29:39.601422Z 01O Message: Forbidden 2026-10-12T04:29:39.601422Z 01O URL: https://stackoverflow.com/questions/18969420/perform-a-semi-join-with-data-table 2026-10-12T04:29:39.601422Z 01O From: inst/doc/datatable-joins.html 2026-10-12T04:29:39.601423Z 01O Status: 403 2026-10-12T04:29:39.601423Z 01O Message: Forbidden 2026-10-12T04:29:39.601423Z 01O URL: https://stackoverflow.com/questions/20039335/what-is-the-purpose-of-setting-a-key-in-data-table/20057411#20057411 2026-10-12T04:29:39.601424Z 01O From: inst/doc/datatable-faq.html 2026-10-12T04:29:39.601424Z 01O Status: 403 2026-10-12T04:29:39.601425Z 01O Message: Forbidden 2026-10-12T04:29:39.601425Z 01O URL: https://stackoverflow.com/questions/20345022/convert-a-data-frame-to-a-data-table-without-copy 2026-10-12T04:29:39.601425Z 01O From: man/setDT.Rd 2026-10-12T04:29:39.601426Z 01O Status: 403 2026-10-12T04:29:39.601426Z 01O Message: Forbidden 2026-10-12T04:29:39.601426Z 01O URL: https://stackoverflow.com/questions/22137591/about-gforce-in-data-table-1-9-2 2026-10-12T04:29:39.601427Z 01O From: inst/doc/datatable-sd-usage.html 2026-10-12T04:29:39.601427Z 01O Status: 403 2026-10-12T04:29:39.601427Z 01O Message: Forbidden 2026-10-12T04:29:39.601428Z 01O URL: https://stackoverflow.com/questions/258091/when-should-i-use-mmap-for-file-access 2026-10-12T04:29:39.601428Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601428Z 01O Status: 403 2026-10-12T04:29:39.601429Z 01O Message: Forbidden 2026-10-12T04:29:39.601429Z 01O URL: https://stackoverflow.com/questions/29658627/conditional-binary-join-and-update-by-reference-using-the-data-table-package 2026-10-12T04:29:39.601430Z 01O From: inst/doc/datatable-sd-usage.html 2026-10-12T04:29:39.601430Z 01O Status: 403 2026-10-12T04:29:39.601430Z 01O Message: Forbidden 2026-10-12T04:29:39.601430Z 01O URL: https://stackoverflow.com/questions/31329939/conditional-keyed-join-update-and-update-a-flag-column-for-matches 2026-10-12T04:29:39.601431Z 01O From: inst/doc/datatable-sd-usage.html 2026-10-12T04:29:39.601431Z 01O Status: 403 2026-10-12T04:29:39.601432Z 01O Message: Forbidden 2026-10-12T04:29:39.601432Z 01O URL: https://stackoverflow.com/questions/35179911/shift-in-data-table-v1-9-6-is-slow-for-many-groups 2026-10-12T04:29:39.601432Z 01O From: NEWS.md 2026-10-12T04:29:39.601433Z 01O Status: 403 2026-10-12T04:29:39.601433Z 01O Message: Forbidden 2026-10-12T04:29:39.601433Z 01O URL: https://stackoverflow.com/questions/36256706/fread-together-with-grepl/36270543#36270543 2026-10-12T04:29:39.601434Z 01O From: inst/doc/datatable-fread-and-fwrite.html 2026-10-12T04:29:39.601434Z 01O Status: 403 2026-10-12T04:29:39.601434Z 01O Message: Forbidden 2026-10-12T04:29:39.601435Z 01O URL: https://stackoverflow.com/questions/415515/how-can-i-read-and-manipulate-csv-file-data-in-c 2026-10-12T04:29:39.601435Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601435Z 01O Status: 403 2026-10-12T04:29:39.601436Z 01O Message: Forbidden 2026-10-12T04:29:39.601436Z 01O URL: https://stackoverflow.com/questions/45972/mmap-vs-reading-blocks 2026-10-12T04:29:39.601436Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601437Z 01O Status: 403 2026-10-12T04:29:39.601437Z 01O Message: Forbidden 2026-10-12T04:29:39.601437Z 01O URL: https://stackoverflow.com/questions/9061736/faster-than-scan-with-rcpp 2026-10-12T04:29:39.601443Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601444Z 01O Status: 403 2026-10-12T04:29:39.601444Z 01O Message: Forbidden 2026-10-12T04:29:39.601444Z 01O URL: https://stackoverflow.com/questions/9352887/strategies-for-reading-in-csv-files-in-pieces 2026-10-12T04:29:39.601445Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601445Z 01O Status: 403 2026-10-12T04:29:39.601445Z 01O Message: Forbidden 2026-10-12T04:29:39.601445Z 01O URL: https://stackoverflow.com/questions/9608950/reading-huge-files-using-memory-mapped-files 2026-10-12T04:29:39.601446Z 01O From: man/fread.Rd 2026-10-12T04:29:39.601446Z 01O Status: 403 2026-10-12T04:29:39.601446Z 01O Message: Forbidden 2026-10-12T04:29:39.601447Z 01O URL: https://stackoverflow.com/questions/tagged/data.table 2026-10-12T04:29:39.601447Z 01O From: README.md 2026-10-12T04:29:39.601447Z 01O Status: 403 2026-10-12T04:29:39.601448Z 01O Message: Forbidden 2026-10-12T04:29:39.601448Z 01O URL: https://stackoverflow.com/questions/tagged/data.table/ 2026-10-12T04:29:39.601448Z 01O From: man/assign.Rd 2026-10-12T04:29:39.601449Z 01O Status: 403 2026-10-12T04:29:39.601449Z 01O Message: Forbidden 2026-10-12T04:29:39.601449Z 01O 2026-10-12T04:29:39.601450Z 01O Size of tarball: 6033938 bytes 2026-10-12T04:29:39.601624Z 01O * checking package namespace information ... OK 2026-10-12T04:29:39.609126Z 01O * checking package dependencies ... OK 2026-10-12T04:29:40.690576Z 01O * checking if this is a source package ... OK 2026-10-12T04:29:40.692426Z 01O * checking if there is a namespace ... OK 2026-10-12T04:29:40.695604Z 01O * checking for .dll and .exe files ... OK 2026-10-12T04:29:40.695891Z 01O * checking for hidden files and directories ... OK 2026-10-12T04:29:40.697368Z 01O * checking for portable file names ... OK 2026-10-12T04:29:40.700700Z 01O * checking for sufficient/correct file permissions ... OK 2026-10-12T04:29:40.704491Z 01O * checking whether package ‘data.table’ can be installed ... [37s/19s] OK 2026-10-12T04:29:59.310163Z 01O * used C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’ 2026-10-12T04:29:59.310431Z 01O * checking installed package size ... INFO 2026-10-12T04:29:59.313655Z 01O installed size is 9.1Mb 2026-10-12T04:29:59.314338Z 01O sub-directories of 1Mb or more: 2026-10-12T04:29:59.314667Z 01O doc 1.1Mb 2026-10-12T04:29:59.314668Z 01O libs 2.7Mb 2026-10-12T04:29:59.314668Z 01O po 1.7Mb 2026-10-12T04:29:59.314669Z 01O tests 2.2Mb 2026-10-12T04:29:59.324472Z 01O * checking package directory ... OK 2026-10-12T04:29:59.324660Z 01O * checking for future file timestamps ... OK 2026-10-12T04:29:59.325086Z 01O * checking ‘build’ directory ... OK 2026-10-12T04:29:59.325727Z 01O * checking DESCRIPTION meta-information ... OK 2026-10-12T04:29:59.955084Z 01O * checking top-level files ... OK 2026-10-12T04:30:01.280755Z 01O * checking for left-over files ... OK 2026-10-12T04:30:01.282629Z 01O * checking index information ... OK 2026-10-12T04:30:01.424297Z 01O * checking package subdirectories ... OK 2026-10-12T04:30:01.849860Z 01O * checking code files for non-ASCII characters ... OK 2026-10-12T04:30:01.894876Z 01O * checking R files for syntax errors ... OK 2026-10-12T04:30:01.964058Z 01O * checking whether the package can be loaded ... OK 2026-10-12T04:30:02.148475Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-10-12T04:30:02.292990Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-10-12T04:30:02.434729Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-10-12T04:30:02.585962Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-10-12T04:30:02.775446Z 01O * checking loading without being on the library search path ... OK 2026-10-12T04:30:03.140273Z 01O * checking whether startup messages can be suppressed ... OK 2026-10-12T04:30:03.324613Z 01O * checking use of S3 registration ... OK 2026-10-12T04:30:04.275940Z 01O * checking dependencies in R code ... OK 2026-10-12T04:30:05.040498Z 01O * checking S3 generic/method consistency ... OK 2026-10-12T04:30:05.377825Z 01O * checking replacement functions ... OK 2026-10-12T04:30:05.577381Z 01O * checking foreign function calls ... OK 2026-10-12T04:30:06.267948Z 01O * checking R code for possible problems ... [14s/14s] OK 2026-10-12T04:30:20.325342Z 01O * checking Rd files ... OK 2026-10-12T04:30:20.839623Z 01O * checking Rd metadata ... OK 2026-10-12T04:30:20.879286Z 01O * checking Rd line widths ... OK 2026-10-12T04:30:21.160497Z 01O * checking Rd cross-references ... OK 2026-10-12T04:30:21.618322Z 01O * checking for missing documentation entries ... OK 2026-10-12T04:30:21.824048Z 01O * checking for code/documentation mismatches ... OK 2026-10-12T04:30:22.771432Z 01O * checking Rd \usage sections ... OK 2026-10-12T04:30:23.625047Z 01O * checking Rd contents ... OK 2026-10-12T04:30:24.021021Z 01O * checking for unstated dependencies in examples ... OK 2026-10-12T04:30:24.432664Z 01O * checking line endings in shell scripts ... OK 2026-10-12T04:30:24.432965Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-10-12T04:30:24.447037Z 01O * checking line endings in Makefiles ... OK 2026-10-12T04:30:24.447342Z 01O * checking compilation flags in Makevars ... OK 2026-10-12T04:30:24.495896Z 01O * checking for GNU extensions in Makefiles ... OK 2026-10-12T04:30:24.496460Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-10-12T04:30:24.497387Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK 2026-10-12T04:30:24.499583Z 01O * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK 2026-10-12T04:30:24.503588Z 01O * checking pragmas in C/C++ headers and code ... OK 2026-10-12T04:30:24.524437Z 01O * checking compilation flags used ... OK 2026-10-12T04:30:24.525943Z 01O * checking compiled code ... NOTE 2026-10-12T04:30:24.592888Z 01O File ‘data.table/libs/data.table.so’: 2026-10-12T04:30:24.592890Z 01O Found non-API calls to R: ‘IS_GROWABLE’, ‘LEVELS’, ‘R_GetConnection’, 2026-10-12T04:30:24.592891Z 01O ‘R_ReadConnection’, ‘SETLENGTH’, ‘SET_GROWABLE_BIT’, 2026-10-12T04:30:24.592892Z 01O ‘SET_TRUELENGTH’, ‘TRUELENGTH’, ‘XTRUELENGTH’ 2026-10-12T04:30:24.593244Z 01O 2026-10-12T04:30:24.593244Z 01O Compiled code should not call non-API entry points in R. 2026-10-12T04:30:24.593251Z 01O 2026-10-12T04:30:24.593252Z 01O See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, 2026-10-12T04:30:24.593252Z 01O and section ‘Moving into C API compliance’ for issues with the use of 2026-10-12T04:30:24.593253Z 01O non-API entry points. 2026-10-12T04:30:24.594114Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-10-12T04:30:24.770367Z 01O * checking files in ‘vignettes’ ... OK 2026-10-12T04:30:24.951009Z 01O * checking examples ... OK 2026-10-12T04:30:32.126156Z 01O * checking examples with --run-donttest ... OK 2026-10-12T04:30:42.317705Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-10-12T04:30:42.376999Z 01O * checking tests ... 2026-10-12T04:30:42.513102Z 01E Running ‘autoprint.R’ 2026-10-12T04:30:42.736758Z 01E Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK 2026-10-12T04:30:42.742831Z 01E Running ‘froll.R’ [391s/375s] 2026-10-12T04:36:57.792938Z 01E Running ‘litedown.R’ 2026-10-12T04:36:58.067223Z 01E Running ‘main.R’ [40s/37s] 2026-10-12T04:37:35.153356Z 01E Running ‘mergelist.R’ 2026-10-12T04:37:36.515757Z 01E Running ‘nafill.R’ 2026-10-12T04:37:36.924657Z 01E Running ‘optimize.R’ 2026-10-12T04:37:38.043946Z 01E Running ‘other.R’ 2026-10-12T04:37:38.230903Z 01E Running ‘programming.R’ 2026-10-12T04:37:38.698254Z 01E Running ‘S4.R’ 2026-10-12T04:37:38.985989Z 01E Running ‘self.R’ 2026-10-12T04:37:39.180400Z 01E Running ‘types.R’ 2026-10-12T04:37:39.381611Z 01O [436s/417s] OK 2026-10-12T04:37:39.451003Z 01O * checking for unstated dependencies in vignettes ... OK 2026-10-12T04:37:39.684118Z 01O * checking package vignettes ... OK 2026-10-12T04:37:40.051266Z 01O * checking re-building of vignette outputs ... [24s/24s] OK 2026-10-12T04:38:04.360379Z 01O * checking PDF version of manual ... OK 2026-10-12T04:38:09.310303Z 01O * checking HTML version of manual ... OK 2026-10-12T04:38:11.981266Z 01O * checking for non-standard things in the check directory ... OK 2026-10-12T04:38:11.981546Z 01O * checking for detritus in the temp directory ... OK 2026-10-12T04:38:11.982015Z 01O * DONE 2026-10-12T04:38:11.982400Z 01E 2026-10-12T04:38:11.982486Z 01O Status: 2 NOTEs 2026-10-12T04:38:11.982640Z 01E See 2026-10-12T04:38:11.982641Z 01E ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’ 2026-10-12T04:38:11.982642Z 01E for details. 2026-10-12T04:38:11.982880Z 01E 2026-10-12T04:38:12.002889Z 01O * installing *source* package ‘data.table’ ... 2026-10-12T04:38:12.002893Z 01O ** this is package ‘data.table’ version ‘1.18.99’ 2026-10-12T04:38:12.002895Z 01O ** using staged installation 2026-10-12T04:38:12.002895Z 01O gcc -std=gnu23 14.2.0 2026-10-12T04:38:12.002896Z 01O zlib 1.3.1 is available ok 2026-10-12T04:38:12.002896Z 01O * checking if OpenMP works with CFLAGS='' LIBS=''... yes 2026-10-12T04:38:12.002897Z 01O ** libs 2026-10-12T04:38:12.002897Z 01O using C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’ 2026-10-12T04:38:12.002898Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c assign.c -o assign.o 2026-10-12T04:38:12.002899Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c between.c -o between.o 2026-10-12T04:38:12.002899Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c bmerge.c -o bmerge.o 2026-10-12T04:38:12.002900Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c chmatch.c -o chmatch.o 2026-10-12T04:38:12.002901Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c cj.c -o cj.o 2026-10-12T04:38:12.002902Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c coalesce.c -o coalesce.o 2026-10-12T04:38:12.002902Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c deleterows.c -o deleterows.o 2026-10-12T04:38:12.002903Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c dogroups.c -o dogroups.o 2026-10-12T04:38:12.002904Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fastmean.c -o fastmean.o 2026-10-12T04:38:12.002905Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fcast.c -o fcast.o 2026-10-12T04:38:12.002905Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fifelse.c -o fifelse.o 2026-10-12T04:38:12.002906Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fmelt.c -o fmelt.o 2026-10-12T04:38:12.002933Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c forder.c -o forder.o 2026-10-12T04:38:12.002934Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frank.c -o frank.o 2026-10-12T04:38:12.002934Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fread.c -o fread.o 2026-10-12T04:38:12.002935Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c freadR.c -o freadR.o 2026-10-12T04:38:12.002936Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c froll.c -o froll.o 2026-10-12T04:38:12.002937Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frollR.c -o frollR.o 2026-10-12T04:38:12.002937Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frolladaptive.c -o frolladaptive.o 2026-10-12T04:38:12.002938Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c frollapply.c -o frollapply.o 2026-10-12T04:38:12.002939Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fsort.c -o fsort.o 2026-10-12T04:38:12.002940Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fwrite.c -o fwrite.o 2026-10-12T04:38:12.002940Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c fwriteR.c -o fwriteR.o 2026-10-12T04:38:12.002941Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c gsumm.c -o gsumm.o 2026-10-12T04:38:12.002942Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c hash.c -o hash.o 2026-10-12T04:38:12.002943Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c idatetime.c -o idatetime.o 2026-10-12T04:38:12.002944Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c ijoin.c -o ijoin.o 2026-10-12T04:38:12.002944Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c init.c -o init.o 2026-10-12T04:38:12.002945Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c inrange.c -o inrange.o 2026-10-12T04:38:12.002951Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c mergelist.c -o mergelist.o 2026-10-12T04:38:12.002952Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c nafill.c -o nafill.o 2026-10-12T04:38:12.002953Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c negate.c -o negate.o 2026-10-12T04:38:12.002954Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c nqrecreateindices.c -o nqrecreateindices.o 2026-10-12T04:38:12.002955Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c openmp-utils.c -o openmp-utils.o 2026-10-12T04:38:12.002955Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c programming.c -o programming.o 2026-10-12T04:38:12.002956Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c quickselect.c -o quickselect.o 2026-10-12T04:38:12.002957Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c rbindlist.c -o rbindlist.o 2026-10-12T04:38:12.002958Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c reorder.c -o reorder.o 2026-10-12T04:38:12.002959Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c shellsort.c -o shellsort.o 2026-10-12T04:38:12.002959Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c shift.c -o shift.o 2026-10-12T04:38:12.002960Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c snprintf.c -o snprintf.o 2026-10-12T04:38:12.002961Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c subset.c -o subset.o 2026-10-12T04:38:12.002962Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c transpose.c -o transpose.o 2026-10-12T04:38:12.002963Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c types.c -o types.o 2026-10-12T04:38:12.002963Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c uniqlist.c -o uniqlist.o 2026-10-12T04:38:12.002969Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o 2026-10-12T04:38:12.002970Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c vecseq.c -o vecseq.o 2026-10-12T04:38:12.002971Z 01O gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fvisibility=hidden -fpic -g -O3 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c wrappers.c -o wrappers.o 2026-10-12T04:38:12.002972Z 01O gcc -std=gnu23 -shared -L/usr/lib/R/lib -Wl,-z,relro -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o deleterows.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fvisibility=hidden -lz -L/usr/lib/R/lib -lR 2026-10-12T04:38:12.002973Z 01O PKG_CFLAGS = -fvisibility=hidden 2026-10-12T04:38:12.002974Z 01O PKG_LIBS = -fvisibility=hidden -lz 2026-10-12T04:38:12.002974Z 01O installing to /builds/Rdatatable/data.table/data.table.Rcheck/00LOCK-data.table/00new/data.table/libs 2026-10-12T04:38:12.002975Z 01O ** R 2026-10-12T04:38:12.002975Z 01O ** inst 2026-10-12T04:38:12.002975Z 01O ** byte-compile and prepare package for lazy loading 2026-10-12T04:38:12.002976Z 01O ** help 2026-10-12T04:38:12.002976Z 01O *** installing help indices 2026-10-12T04:38:12.002976Z 01O ** building package indices 2026-10-12T04:38:12.002976Z 01O ** installing vignettes 2026-10-12T04:38:12.002977Z 01O ** testing if installed package can be loaded from temporary location 2026-10-12T04:38:12.002977Z 01O ** checking absolute paths in shared objects and dynamic libraries 2026-10-12T04:38:12.002978Z 01O ** testing if installed package can be loaded from final location 2026-10-12T04:38:12.002978Z 01O ** testing if installed package keeps a record of temporary installation path 2026-10-12T04:38:12.002979Z 01O * DONE (data.table) 2026-10-12T04:38:12.291996Z 00O section_end:1791779892:step_script  2026-10-12T04:38:12.292405Z 00O+section_start:1791779892:after_script  2026-10-12T04:38:12.292410Z 00O+Running after_script 2026-10-12T04:38:12.563428Z 01O Running after script... 2026-10-12T04:38:12.563456Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-10-12T04:38:12.564362Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-10-12T04:38:12.564364Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-10-12T04:38:12.564432Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-10-12T04:38:12.564456Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-10-12T04:38:12.699970Z 00O section_end:1791779892:after_script  2026-10-12T04:38:12.700651Z 00O+section_start:1791779892:upload_artifacts_on_success  2026-10-12T04:38:12.700656Z 00O+Uploading artifacts for successful job 2026-10-12T04:38:13.018203Z 01O Uploading artifacts... 2026-10-12T04:38:13.059438Z 01E bus/test-lin-rel: found 720 matching artifact files and directories 2026-10-12T04:38:14.293537Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=3bcf84af140f43d68ee64ed67adbbb1c id=17100991412 status=201 token=74_YD46ip 2026-10-12T04:38:14.442339Z 00O section_end:1791779894:upload_artifacts_on_success  2026-10-12T04:38:14.442639Z 00O+section_start:1791779894:cleanup_file_variables  2026-10-12T04:38:14.442643Z 00O+Cleaning up project directory and file based variables 2026-10-12T04:38:14.889096Z 00O section_end:1791779894:cleanup_file_variables  2026-10-12T04:38:14.918928Z 00O Job succeeded